prot_Ecto-sp13_S_contig14770.3642.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14770.3642.1
Unique Nameprot_Ecto-sp13_S_contig14770.3642.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14770.3642.1 vs. uniprot
Match: D7G8H9_ECTSI (VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H9_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.520e-35
Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 KSDAAWRLDVGNDTTVEVDESTSYIRRHQSRSLTDGNTSLPDEPLRASGSNVVVNTTQPVVTGVYGINGNG 71
            KSDAAWRLDVGNDTTVEVDESTSYIRRHQSRSLTDGNTSLPDEPLRASGSN+VVNTTQPVVTGVYG+NGNG
Sbjct: 1032 KSDAAWRLDVGNDTTVEVDESTSYIRRHQSRSLTDGNTSLPDEPLRASGSNIVVNTTQPVVTGVYGVNGNG 1102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14770.3642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8H9_ECTSI2.520e-3597.18VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14770contigEcto-sp13_S_contig14770:1459..2990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14770.3642.1mRNA_Ecto-sp13_S_contig14770.3642.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14770 1457..2990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14770.3642.1 ID=prot_Ecto-sp13_S_contig14770.3642.1|Name=mRNA_Ecto-sp13_S_contig14770.3642.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
KSDAAWRLDVGNDTTVEVDESTSYIRRHQSRSLTDGNTSLPDEPLRASGS
NVVVNTTQPVVTGVYGINGNGPFGYNQEVEIRVDFSLPVTVPEVEETAST
TTTTTASAATTDEPSIPVLSVVIGSTSTARMTTYLTAAAIYTTEDVSSTD
ATSSALPNASLHNSTSVLLKYLVAADDESVDLRHLDSSSLVGDI
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