prot_Ecto-sp13_S_contig14764.3638.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14764.3638.1
Unique Nameprot_Ecto-sp13_S_contig14764.3638.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Match: D7FXV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV8_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 6.150e-28
Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 0
Query:    1 MSIVAGAVGGGLVVGAIAAVVLLVKTGRLKRCGNDNSSEPSPGVGSITAAAPSATSRAMEETQLPAAAQYPEALHT 76
            MS+VAGAVGGGLVVGAIAAVVLL KTGRLK CGNDNSSEPSPGVGSI A APSATS A+  TQLPAA QYPEAL T
Sbjct:  360 MSVVAGAVGGGLVVGAIAAVVLLFKTGRLKPCGNDNSSEPSPGVGSIPAGAPSATSSAIAGTQLPAAMQYPEALRT 435          
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.320e-15
Identity = 48/70 (68.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    6 GAVGGGLVVGAIAAVVLLVKTGRLKRCGNDNSSEPSPGVGSITAAA-PSATSRAMEETQLPAAAQYPEAL 74
            G  GGGLVVGAIA ++LL KTGRLK C N NS  PSPGVG I AAA PSA   A    QLPAA QYPEAL
Sbjct:  295 GGFGGGLVVGAIAILILLFKTGRLKHCRNGNSHGPSPGVGQIPAAAGPSAMESARRGMQLPAAIQYPEAL 364          
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 6.150e-14
Identity = 49/75 (65.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 MSIVAGAVGGGLVVGAIAAVVLLVKTGRLKRCGNDNSSEPSPGVGSITAAA-PSATSRAMEETQLPAAAQYPEAL 74
            MS+VA AVGGGLVVGAIA ++LL KTGRLK C N +S   S GVG I AAA PSA   A    Q+PAA QYPEAL
Sbjct:  266 MSVVAVAVGGGLVVGAIATLILLFKTGRLKHCRNGSSHGTSRGVGPIPAAAGPSAMESARRGMQIPAAIQYPEAL 340          
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.330e-13
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 MSIVAGAVGGGLVVGAIAAVVLLVKTGRLKRCGNDNSSEPSPGVGSITAAAPSATSRAMEETQLPAAAQYPEALH 75
            + +VAG +G G       AVV+L KTGRLK C +   + PSPG+GSI AAAPSATS AME  QLP A QYPE LH
Sbjct:  200 VGLVAGVLGVGXXXXXXGAVVVLFKTGRLKSCRHGTPNGPSPGMGSIPAAAPSATSSAMEGIQLPPAIQYPEVLH 274          
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Match: A0A6H5JTE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE7_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.410e-9
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0
Query:   35 DNSSEPSPGVGSITAAAPSATSRAMEETQLPAAAQYPEALHT 76
            D+  + +PGVGSI A+APSATSRAME TQLPAA QYPEALHT
Sbjct:  107 DDMVDDNPGVGSIPASAPSATSRAMEGTQLPAAMQYPEALHT 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14764.3638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXV8_ECTSI6.150e-2885.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE7.320e-1568.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I5_ECTSI6.150e-1465.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYB8_ECTSI1.330e-1358.67Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JTE7_9PHAE1.410e-976.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..76
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14764contigEcto-sp13_S_contig14764:2921..3151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14764.3638.1mRNA_Ecto-sp13_S_contig14764.3638.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14764 2473..3722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14764.3638.1 ID=prot_Ecto-sp13_S_contig14764.3638.1|Name=mRNA_Ecto-sp13_S_contig14764.3638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MSIVAGAVGGGLVVGAIAAVVLLVKTGRLKRCGNDNSSEPSPGVGSITAA
APSATSRAMEETQLPAAAQYPEALHT*
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