prot_Ecto-sp13_S_contig14745.3628.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14745.3628.1
Unique Nameprot_Ecto-sp13_S_contig14745.3628.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length248
Homology
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A6H5JYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV6_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.790e-122
Identity = 208/248 (83.87%), Postives = 209/248 (84.27%), Query Frame = 0
Query:    1 RCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVAAARAKLPRAAVDESDXXXXXXXXXXXXXXXXXXXXXGDIDXXXXXXXDDSSGKKRHTXXXXXXXXXXXXXXXXXXXXXXDADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ 248
            RCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVA A  KLPRAAVDESD                     GDID       DDS G K     XXXXXXXXXXXXXXXXXXXX ADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELI+KRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ
Sbjct:   32 RCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVADAGTKLPRAAVDESDYDHHHGGTDVGARSSSNATDNGDIDSSDNGDGDDSIGNKPPATGXXXXXXXXXXXXXXXXXXXX-ADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ 278          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: D8LDP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP6_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 1.880e-118
Identity = 201/248 (81.05%), Postives = 204/248 (82.26%), Query Frame = 0
Query:    1 RCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVAAARAKLPRAAVDESDXXXXXXXXXXXXXXXXXXXXXGDIDXXXXXXXDDSSGKKRHTXXXXXXXXXXXXXXXXXXXXXXDADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ 248
            RCIRATL GPLARKHFQAMSVARWGEGCRCQYAVAAA  KLPRAA D SD                     GD D       D  SG K HT   XXXXXXXXXXXXXXXXXXX ADWLAFYLRRVGHRAARPSPLNLLQEHY +DAY LLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLG+LRKTLLPLGLNRELI+KRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ
Sbjct:   32 RCIRATLVGPLARKHFQAMSVARWGEGCRCQYAVAAAGTKLPRAAADGSDFDHHHGGTGAGARNSYAADN-GDGD-------DVRSGDKPHTTGNXXXXXXXXXXXXXXXXXXXXADWLAFYLRRVGHRAARPSPLNLLQEHYAKDAYHLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGDLRKTLLPLGLNRELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ 271          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A835ZF17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF17_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.840e-42
Identity = 75/126 (59.52%), Postives = 89/126 (70.63%), Query Frame = 0
Query:  118 WLAFYLRRVGHRAARP--SPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG 241
            W A+YLRRV H AARP  SPL+L+QE +  +A+ LL+   LCSRTSGG  V+  + AF E  PTP SVL+AD   LR  LLPLGLNRE  + RFA  F    W DPSELHGCG+ A+DSW+IFCLG
Sbjct:   33 WSAYYLRRVSHVAARPPLSPLDLVQERHARNAFTLLASVQLCSRTSGGALVRGVIDAFMELYPTPQSVLSADAAALRALLLPLGLNRERTLARFALEFATKPWRDPSELHGCGKLAADSWRIFCLG 158          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A7S2PHI3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHI3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.120e-35
Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  118 WLAFYLRRVGHRAA--RPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHR 244
            W  +Y  R        + S L+L+QE Y  D Y+LLS CILCSRTSG   V+D VKAFFE   TP+ +L+ D+  + K L PLGLNRE  MK+FA+GFL   W   SELHGCG FAS S+ IFC G+ +
Sbjct:   31 WYEYYRHRCSWMPLPRQKSKLDLIQEDYGHDPYKLLSACILCSRTSGSQNVRDVVKAFFEKYKTPSDILSGDIATIEKELKPLGLNREKTMKKFAQGFLRP-WTQVSELHGCGAFASSSFDIFCRGDFK 158          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: K0R6H7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6H7_THAOC)

HSP 1 Score: 128 bits (322), Expect = 2.740e-32
Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 0
Query:  117 DWLAFYLRRVGHRA--ARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDP--SELHGCGRFASDSWQIFCLGNHR 244
            DW  ++  R       +  SPL+L+QE Y +D +R+LS CIL SRTSGG  ++  +  FFEA P+PT+V+  D  ++   L PLGLNRE  MKRFA  FL+  W D   S LHGCG FA +SW +FC G ++
Sbjct:   95 DWYKYFCNRSASARLPSECSPLDLIQERYADDPFRMLSSCILASRTSGGFIIRRVISDFFEAYPSPTAVINGDTNDMATMLHPLGLNRERTMKRFAIDFLSPEWTDGRVSRLHGCGNFAQNSWDVFCHGRYQ 226          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A5A8DJ41_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJ41_CAFRO)

HSP 1 Score: 118 bits (295), Expect = 1.560e-29
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  134 SPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVL----AADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHR 244
            SP+ + QE Y  D ++LLS C+L SRTSGGD V   ++AFFE  PTPT+VL    A  L  + + L PLGLNRE  + R AEGFL   W  PSEL+GCG+FA DSW  FC G  R
Sbjct:    3 SPMKMFQETYGYDPWKLLSGCVLSSRTSGGDRVWGPIRAFFERFPTPTAVLDEAEANGLAGMEEMLKPLGLNRERTITRAAEGFLR-VWDRPSELYGCGKFAEDSWLAFCHGEVR 116          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A7S4MVC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVC1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.480e-29
Identity = 63/131 (48.09%), Postives = 81/131 (61.83%), Query Frame = 0
Query:  117 DWLAFYLRRVGHRAARP---SPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHR 244
            +W  +Y  R   R   P   SPL+L+QE +  DA+ LLS CILCSRTSG D ++ ++  F     TPT V+ AD   LR+ LLPLGLNRE  ++RFA  FL+  W   S+LHGCG FA  S ++FC G  R
Sbjct:  100 EWFRYYRLRASLRWDMPPVSSPLDLIQERHRSDAWSLLSTCILCSRTSGSDKIRSSIAEFHATYRTPTDVVRADESILREMLLPLGLNRERTLRRFAIEFLSLEWRHVSDLHGCGAFADASHRVFCRGKWR 230          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A5A8D4V5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4V5_CAFRO)

HSP 1 Score: 118 bits (295), Expect = 1.430e-28
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  134 SPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVL----AADLGELRKTLLPLGLNRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHR 244
            SP+ + QE Y  D ++LLS C+L SRTSGGD V   ++AFFE  PTPT+VL    A  L  + + L PLGLNRE  + R AEGFL   W  PSEL+GCG+FA DSW  FC G  R
Sbjct:    3 SPMKMFQETYGYDPWKLLSGCVLSSRTSGGDRVWGPIRAFFERFPTPTAVLDEAEANGLAGMEEMLKPLGLNRERTITRAAEGFLR-VWDRPSELYGCGKFAEDSWLAFCHGEVR 116          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A2P6VFC8_9CHLO (DNA glycosylase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFC8_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 1.770e-28
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  118 WLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGL--NRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG 241
            W A+   R+   +  PSPL+L+QEH+T+  ++ +  C+LCSRT+GG  V+ A++ F    PTP+ VLAA    L   + PLGL  +R   ++  A GFLA+ W +PS+ HGCG+F SDS+ IFC G
Sbjct:   64 WAAWTKHRLCAASHPPSPLDLIQEHFTDCPFQHMVACVLCSRTTGGPVVRQAIQLFLLLYPTPSDVLAAGDDSLLAVMHPLGLGASRLAAVRSIAHGFLATDWQEPSQFHGCGKFVSDSYHIFCRG 189          
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Match: A0A383WAV0_TETOB (F-box domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WAV0_TETOB)

HSP 1 Score: 114 bits (284), Expect = 7.170e-26
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0
Query:  118 WLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELI--MKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLG 241
            W  +  +R+  +  R SPL+LLQE Y  D +  ++CC+LCSRTSG  T++  +  FF+A P+P++ L      +   L PLGL +  +  ++  A+GFL + W DPSE  GCG+F SDSW+IFC G
Sbjct:  113 WQHYCCKRMSLKTIRSSPLSLLQEAYP-DPWMHITCCVLCSRTSGSATIRSCIARFFQAFPSPSACLQGCPQAMAVLLHPLGLMQARLAAVRAVAQGFLGTDWQDPSEFKGCGKFVSDSWRIFCKG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14745.3628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYV6_9PHAE1.790e-12283.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDP6_ECTSI1.880e-11881.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF17_9STRA2.840e-4259.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2PHI3_9STRA3.120e-3551.94Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0R6H7_THAOC2.740e-3246.97Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A5A8DJ41_CAFRO1.560e-2953.91Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S4MVC1_9STRA2.480e-2948.09Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A5A8D4V5_CAFRO1.430e-2853.91Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A2P6VFC8_9CHLO1.770e-2844.44DNA glycosylase isoform A n=1 Tax=Micractinium con... [more]
A0A383WAV0_TETOB7.170e-2642.86F-box domain-containing protein n=1 Tax=Tetradesmu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30coord: 125..247
e-value: 1.8E-26
score: 94.5
NoneNo IPR availablePANTHERPTHR150745-METHYLCYTOSINE G/T MISMATCH-SPECIFIC DNA GLYCOSYLASEcoord: 133..242
NoneNo IPR availablePANTHERPTHR15074:SF0METHYL-CPG-BINDING DOMAIN PROTEIN 4-LIKE PROTEINcoord: 133..242
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 134..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14745contigEcto-sp13_S_contig14745:2321..3658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14745.3628.1mRNA_Ecto-sp13_S_contig14745.3628.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14745 2319..3658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14745.3628.1 ID=prot_Ecto-sp13_S_contig14745.3628.1|Name=mRNA_Ecto-sp13_S_contig14745.3628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp
RCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVAAARAKLPRAAVDESD
YDHHHGGTGAGARSSSNATENGDIDSSGNGDGDDSSGKKRHTTGNNNKNS
PDEEEGRRDSGGGGDADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRL
LSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGL
NRELIMKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase