prot_Ecto-sp13_S_contig1474.3625.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1474.3625.1
Unique Nameprot_Ecto-sp13_S_contig1474.3625.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: D8LSS1_ECTSI (CENP-V/GFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSS1_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.800e-49
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 MAETKRTLTCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRCK 77
            MAETKRTLTCWCG+VEMELVG PLASLHCHC ICQKWSGAPFQWLVLYKADKTS+VKGKDNITITRTSEDMERGRCK
Sbjct:    1 MAETKRTLTCWCGDVEMELVGAPLASLHCHCVICQKWSGAPFQWLVLYKADKTSVVKGKDNITITRTSEDMERGRCK 77          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A356PWU1_9PROT (Aldehyde-activating protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A356PWU1_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 5.380e-10
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0
Query:    9 TCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRC 76
            +C+CG VE+E+VG  +A L CHC +C+ WS  P     L++ +   I KG D++     +E  +R  C
Sbjct:   15 SCFCGEVEVEIVGAAVAQLVCHCTVCRSWSATPMTGATLFRPEDVRITKGADSLRRYARNEGHDRCFC 82          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: UPI001B1F3903 (GFA family protein n=1 Tax=Caulobacter sp. TaxID=78 RepID=UPI001B1F3903)

HSP 1 Score: 60.8 bits (146), Expect = 8.760e-10
Identity = 25/68 (36.76%), Postives = 38/68 (55.88%), Query Frame = 0
Query:    9 TCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRC 76
            +C+CG V++E+VG P A  +CHC  C+ WSG P     L+K D   +V G D +   + +   +R  C
Sbjct:    6 SCFCGTVQVEVVGQPEAMGYCHCRSCRSWSGGPVNAFSLWKPDAVRVVSGSDELATYQKTAMSQRRYC 73          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A1Z8ACV5_9RHOB (Aldehyde-activating protein n=1 Tax=Rhodobacterales bacterium 52_120_T64 TaxID=1856301 RepID=A0A1Z8ACV5_9RHOB)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-9
Identity = 23/68 (33.82%), Postives = 38/68 (55.88%), Query Frame = 0
Query:    9 TCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRC 76
            +C+CG V++E+ G+P    +CHC  C+ WS  P     L+K +  S+VKG D +     + + +R  C
Sbjct:    8 SCFCGEVQIEVEGVPEGMGYCHCASCRSWSAGPVNTFTLWKPEAVSVVKGADKLATFEKTPNSQRQFC 75          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A1F3AJ01_9PROT (Aldehyde-activating protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 TaxID=1797224 RepID=A0A1F3AJ01_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 3.530e-9
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 0
Query:   10 CWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRCKA 78
            C CG VE+ L G P+   +CHC  C+ W GAP      +   +   VKG DN+T  + +E+  R  CK+
Sbjct:    8 CACGAVEIALSGSPVLQCYCHCSDCRDWLGAPVHGATGWPKAQVRWVKGADNVTTYKRTENSHRKSCKS 76          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A0D6P6Q1_9PROT (Glutathione-dependent formaldehyde-activating protein n=1 Tax=Acidisphaera rubrifaciens HS-AP3 TaxID=1231350 RepID=A0A0D6P6Q1_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 3.600e-9
Identity = 25/68 (36.76%), Postives = 37/68 (54.41%), Query Frame = 0
Query:   10 CWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRCK 77
            C+CG VE+E+ G P+A  +CHC  C+ WS +P     L+  D   + +G +NI     +E   R  CK
Sbjct:    9 CFCGAVEIEVTGAPVAMGYCHCESCRSWSASPLNAFSLWSPDALKVTRGAENIGEYHKTEMSHRQFCK 76          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A2W4CFI2_9HYPH (Aldehyde-activating protein n=1 Tax=Rhizobium tubonense TaxID=484088 RepID=A0A2W4CFI2_9HYPH)

HSP 1 Score: 57.8 bits (138), Expect = 1.470e-8
Identity = 24/67 (35.82%), Postives = 37/67 (55.22%), Query Frame = 0
Query:   10 CWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRC 76
            C+CG VE+E+ G P+A  +CHC  C++WS  P     L+  D  S+ KG  ++   + +E   R  C
Sbjct:   11 CFCGAVEVEVAGEPVAMGYCHCDSCREWSAGPVNAFTLWPPDAVSVTKGAGHVASYQKTETSIRKWC 77          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A3N4INM7_ASCIM (CENP-V/GFA domain-containing protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4INM7_ASCIM)

HSP 1 Score: 58.5 bits (140), Expect = 1.790e-8
Identity = 30/85 (35.29%), Postives = 44/85 (51.76%), Query Frame = 0
Query:    3 ETKRTLTCWCGNVEMELVGL-PLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRCKASRWPLRAC 86
            E K    C+C  V+ ++    PL+S  CHC +CQK  GAP+QW  +   D     +G DN+   RT+E+ ER  C   +   + C
Sbjct:   40 EPKLHGACYCKAVKFDIDRTEPLSSKFCHCRVCQKLHGAPYQWASIIPKDSLHFTEGHDNLQFYRTTEN-ERAYCPPHKVLCKKC 123          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: A0A7W5BVH2_9GAMM (CENP-V/GFA domain-containing protein n=1 Tax=Halomonas organivorans TaxID=257772 RepID=A0A7W5BVH2_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 1.110e-7
Identity = 25/72 (34.72%), Postives = 37/72 (51.39%), Query Frame = 0
Query:   10 CWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRCKASRW 81
            C+CG V++E+VG P A  +CHC  C+ WS  P     L+K D   I +G++ +      E  E+      RW
Sbjct:    9 CFCGAVQVEVVGKPEAMGYCHCDSCRHWSAGPVNAFTLWKPDAVRITQGEEAL------ESFEKTPASRRRW 74          
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Match: UPI001E5609CD (GFA family protein n=1 Tax=Lysobacter sp. KIS68-7 TaxID=2904252 RepID=UPI001E5609CD)

HSP 1 Score: 54.7 bits (130), Expect = 2.190e-7
Identity = 25/76 (32.89%), Postives = 40/76 (52.63%), Query Frame = 0
Query:    1 MAETKRTLTCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKADKTSIVKGKDNITITRTSEDMERGRC 76
            M++T R   C+CG VE+E  G P+A   CHC  C+ WS AP     L++ D   + +G + +     ++  +R  C
Sbjct:    1 MSDTYRG-ACFCGAVEVETTGAPVAMGFCHCNSCRSWSAAPVNAFTLWQPDAVRVTRGAEFVGHFSKTDFSDRQYC 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1474.3625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LSS1_ECTSI1.800e-4994.81CENP-V/GFA domain-containing protein n=2 Tax=Ectoc... [more]
A0A356PWU1_9PROT5.380e-1036.76Aldehyde-activating protein n=1 Tax=Alphaproteobac... [more]
UPI001B1F39038.760e-1036.76GFA family protein n=1 Tax=Caulobacter sp. TaxID=7... [more]
A0A1Z8ACV5_9RHOB1.290e-933.82Aldehyde-activating protein n=1 Tax=Rhodobacterale... [more]
A0A1F3AJ01_9PROT3.530e-937.68Aldehyde-activating protein n=1 Tax=Alphaproteobac... [more]
A0A0D6P6Q1_9PROT3.600e-936.76Glutathione-dependent formaldehyde-activating prot... [more]
A0A2W4CFI2_9HYPH1.470e-835.82Aldehyde-activating protein n=1 Tax=Rhizobium tubo... [more]
A0A3N4INM7_ASCIM1.790e-835.29CENP-V/GFA domain-containing protein n=1 Tax=Ascob... [more]
A0A7W5BVH2_9GAMM1.110e-734.72CENP-V/GFA domain-containing protein n=1 Tax=Halom... [more]
UPI001E5609CD2.190e-732.89GFA family protein n=1 Tax=Lysobacter sp. KIS68-7 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1590.10coord: 2..83
e-value: 8.7E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR33337FAMILY NOT NAMEDcoord: 1..80
IPR006913Glutathione-dependent formaldehyde-activating enzyme/centromere protein VPFAMPF04828GFAcoord: 28..78
e-value: 7.1E-8
score: 32.7
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 3..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1474contigEcto-sp13_S_contig1474:2407..4336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1474.3625.1mRNA_Ecto-sp13_S_contig1474.3625.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1474 2407..4336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1474.3625.1 ID=prot_Ecto-sp13_S_contig1474.3625.1|Name=mRNA_Ecto-sp13_S_contig1474.3625.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MAETKRTLTCWCGNVEMELVGLPLASLHCHCGICQKWSGAPFQWLVLYKA
DKTSIVKGKDNITITRTSEDMERGRCKASRWPLRAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006913GFA/CENP-V
IPR011057Mss4-like_sf