prot_Ecto-sp13_S_contig14736.3621.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14736.3621.1
Unique Nameprot_Ecto-sp13_S_contig14736.3621.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 2.130e-125
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
Query:    1 SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK
Sbjct:   62 SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 239          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC)

HSP 1 Score: 189 bits (480), Expect = 1.700e-54
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    1 SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            +I  TS G  ++WG  +G  +P P+ V   +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:  138 TIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 313          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.610e-54
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    1 SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            +I  TS G  ++WG  +G  +P P+ V   +PL C++V CGRKH +ALM+GGFV SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:   92 TIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 267          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.420e-48
Identity = 82/159 (51.57%), Postives = 110/159 (69.18%), Query Frame = 0
Query:   21 HPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLG-ERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            +P P+ V   +PL C++V CGRKH +ALM+GG+V SWG GYFGQLG GDN S   PRL+  LDP RLG +RVV VACGG HSAV T    VF +GFNRYGQ G G   N +  P  V++S +      ++ +++CGRHH++++T  G +++WGA SFG+
Sbjct:   28 YPEPSRVSLGVPLRCLQVSCGRKHALALMEGGYVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI---GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGR 183          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.710e-48
Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 0
Query:   31 IPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGS-KDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            +PL  +++ CGR+H+VALM+GGFVM+WG GYFGQLGHGDNAS  +PRLL +L+PQ++    V VA GGYHS   T AGR F WGFNRYGQCG G   D  V EP  V L  +     G V    CGRHH   V  GG +Y WGA  FG+
Sbjct:    3 VPLAAVQIACGRRHSVALMEGGFVMTWGIGYFGQLGHGDNASCTNPRLLHQLEPQQI----VSVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRARGEG-VRAAACGRHHCVAVGTGGGVYAWGAGGFGR 146          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A7S2CLQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLQ1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.090e-37
Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = 0
Query:    1 SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRL-GERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCG-------NGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVT 163
            ++  T++G ++ WG + G++ P P  +     +  + V CGRKHT+ L++G  V+S+GTGYFGQLGHG+++S R+PR++  LD + L G+RV  VA G  HS V T  GR++ WG NR  QCG       +G   +T+  P   DLS V     G   +++CGRHH AL+T
Sbjct:   74 TVAATTQGTVYHWGSDGGEMRPKPELMELGTKVCAVTVACGRKHTLILVEGARVLSYGTGYFGQLGHGNDSSLRNPRVIESLDSKALNGDRVTAVAAGFAHSGVVTHTGRLYMWGLNRSCQCGVEPPTGSSGLAASTLFAPHPTDLSNVKDH--GRPVQLVCGRHHPALLT 242          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.030e-37
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 0
Query:   57 WGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNG----SKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            WGTGYFGQLGHGD++S+  PR++  L+P+RLG +V+ VACGG HS V TD+GRVF WG NR GQCG G     K ++V EP  VD S +       V  ++ GR+HSA+++  G ++TWG   FG+
Sbjct:    1 WGTGYFGQLGHGDDSSWDSPRMISVLEPKRLGAKVINVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLGVKSLVLGRNHSAMLSTTGRVFTWGEAGFGR 126          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A397VL47_9GLOM (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VL47_9GLOM)

HSP 1 Score: 107 bits (268), Expect = 9.930e-25
Identity = 70/189 (37.04%), Postives = 102/189 (53.97%), Query Frame = 0
Query:    2 ILRTSEGKLFRWGVEDGDVHPFP-TGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCG---NGSKDNTVP-----EPSLVDLSR---VTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            I+ T +GKL+   +E   VH    T     I      V CG  H +AL + G V SWG+G +GQLGHGD  S   P+++       LG RV+Q+ACGG+HSA  TD+G ++T+G+N  G+ G       D+T P     EP+L++L+    + P  +    KV CG  H+ ++T    L+T   C +GK
Sbjct:  135 IVVTVDGKLYNLNIEQ--VHSEEITPANDTIDYFFTTVACGENHCLALTQTGQVFSWGSGRYGQLGHGDTKSLDKPKVIEFF----LGLRVIQIACGGWHSATITDSGDLYTFGWNHLGRLGIPPPDESDHTQPSINYAEPTLIELNDGKDMGPNVI----KVSCGSAHTVIITDNYQLWT---CGWGK 310          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A7S2PM89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PM89_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.950e-24
Identity = 66/183 (36.07%), Postives = 96/183 (52.46%), Query Frame = 0
Query:    5 TSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRK---------HTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            T++G L+ WG ++  V         Q     +E   G+K         HT  L   G   +WG G FG+LGHG   +   PRL+  L    LG+R  Q+ACGG+HSAV T+ G+++T+G   +GQ G+G K N V +P+LV   +   G V  + ++ CG  HS  +T  G ++TWG    GK
Sbjct:  103 TNKGCLYTWGDKENGVAGHGDTDGHQYTPKLLERLSGKKVVQLSACGFHTGCLTDQGECFTWGEGKFGRLGHGAERNCHSPRLIETL----LGKRPKQIACGGFHSAVVTEDGKMYTFGGGEHGQLGHGDKVNKV-KPTLV---QALDGIV--LQQITCGWSHSVALTTNGEVFTWGNGDHGK 275          
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Match: A0A7S2A6T9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6T9_TRICV)

HSP 1 Score: 107 bits (267), Expect = 4.070e-24
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 0
Query:    5 TSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRK---------HTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGK 178
            TS G L+ WG ++  V         Q     +E   G++         HT  L   G V +WG G FG+LGHG   +   PRL+  L    LG+R  QVACGG+H+AV T+ GR++T+G   +GQ G+G K N V    +  L  +       V ++ CG  HS  +T  G +YTWG    GK
Sbjct:   51 TSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLAGKRIVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVEAL----LGKRPRQVACGGFHTAVITEDGRMYTFGGGEHGQLGHGDKVNKVKPTFVQALEGIF------VSQITCGWSHSVALTSKGRVYTWGNGDHGK 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14736.3621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE1_ECTSI2.130e-125100.00Similar to retinitis pigmentosa GTPase regulator n... [more]
K8Z8W0_NANGC1.700e-5450.28Hect domain and rld 4 (Fragment) n=1 Tax=Nannochlo... [more]
W7U0Q3_9STRA2.610e-5450.28Putative e3 ubiquitin-protein ligase herc4 n=1 Tax... [more]
A0A4D9DAH8_9STRA1.420e-4851.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835Z434_9STRA1.710e-4855.70Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S2CLQ1_9STRA2.090e-3741.52Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3GVQ9_9STRA4.030e-3750.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A397VL47_9GLOM9.930e-2537.04Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S2PM89_9STRA3.950e-2436.07Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2A6T9_TRICV4.070e-2436.07Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 35..48
score: 33.33
coord: 152..168
score: 28.43
coord: 168..179
score: 26.67
coord: 1..15
score: 16.67
coord: 108..124
score: 43.14
coord: 54..70
score: 32.35
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 108..161
e-value: 8.0E-13
score: 48.8
coord: 52..103
e-value: 1.0E-11
score: 45.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 38..48
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 108..165
score: 13.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 52..107
score: 15.509
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..179
e-value: 2.1E-45
score: 157.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 3..177
NoneNo IPR availablePANTHERPTHR22872BTK-BINDING PROTEIN-RELATEDcoord: 88..173
NoneNo IPR availablePANTHERPTHR22872BTK-BINDING PROTEIN-RELATEDcoord: 35..125
NoneNo IPR availablePANTHERPTHR22872:SF2coord: 35..125
coord: 88..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14736contigEcto-sp13_S_contig14736:3185..4170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14736.3621.1mRNA_Ecto-sp13_S_contig14736.3621.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14736 3184..4170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14736.3621.1 ID=prot_Ecto-sp13_S_contig14736.3621.1|Name=mRNA_Ecto-sp13_S_contig14736.3621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
SILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMK
GGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYH
SAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVP
KVLCGRHHSALVTRGGALYTWGACSFGKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II