prot_Ecto-sp13_S_contig1471.3600.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1471.3600.1
Unique Name	prot_Ecto-sp13_S_contig1471.3600.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	163

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1471.3600.1 vs. uniprot
Match: A0A6H5K154_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K154_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.610e-85
Identity = 143/162 (88.27%), Postives = 148/162 (91.36%), Query Frame = 0

Query:    1 MAPPAGRGGGGARGHGPPGGFRRGDPLPPPXRPPAPAGQFFGGPGVRAGYGGGHGGARGPLGTTCCCWVVLCSVAFVIVVSVGIMLIESLDECTTSTSDSENSNCIAYEVALALGAGXXXXXXXXXXMRPSEEGYQPIDGSASERQYMLATEAPLPQYVHGN 162
            MAPPAGRGGGGARGH  PGGFR G P PP X   APAGQFFGGPGVRA YGGGHGG RGPLGTTCCCWVVLC+ AFVIVV+VGIMLIESL+EC+TSTSDSENSNCIAYEV LA+GAG XXXXXXXXXMRPSEEGYQPIDGSASERQYMLATEAPLPQYVHGN
Sbjct:    1 MAPPAGRGGGGARGHRAPGGFRGGAPRPPXXXXXAPAGQFFGGPGVRARYGGGHGGTRGPLGTTCCCWVVLCTAAFVIVVTVGIMLIESLEECSTSTSDSENSNCIAYEVGLAVGAGVXXXXXXXXXMRPSEEGYQPIDGSASERQYMLATEAPLPQYVHGN 162

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1471.3600.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1471.3600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K154_9PHAE	2.610e-85	88.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 65..86
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 129..162
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 87..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..128
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..64
None	No IPR available	TMHMM	TMhelix		coord: 105..127
None	No IPR available	TMHMM	TMhelix		coord: 68..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1471	contig	Ecto-sp13_S_contig1471:1867..3743 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1471.3600.1	mRNA_Ecto-sp13_S_contig1471.3600.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1471 797..5149 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1471.3600.1 ID=prot_Ecto-sp13_S_contig1471.3600.1|Name=mRNA_Ecto-sp13_S_contig1471.3600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MAPPAGRGGGGARGHGPPGGFRRGDPLPPPPRPPAPAGQFFGGPGVRAGY
GGGHGGARGPLGTTCCCWVVLCSVAFVIVVSVGIMLIESLDECTTSTSDS
ENSNCIAYEVALALGAGVVVLCCCCCCMRPSEEGYQPIDGSASERQYMLA
TEAPLPQYVHGN*