prot_Ecto-sp13_S_contig14704.3597.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14704.3597.1
Unique Nameprot_Ecto-sp13_S_contig14704.3597.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length240
Homology
BLAST of mRNA_Ecto-sp13_S_contig14704.3597.1 vs. uniprot
Match: A0A6H5KST7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST7_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 8.610e-87
Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 0
Query:    2 AVPFEDRVEELEKELSESRRVLKRSDSAASISTVLSAVSSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXKLVETMTLLKDAAKAIPMARGELVGKSERCKQHVGEDAVSFCEANNTNTTGALDHQPGCNAPATGVECDKARLLVGGREEGAGEGSAMQAMATTADKSGGEXXXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAAALGGAAA 215
            AVPFEDRVEELEKELSESRRVLKRS+SAASIST+LSAVSSS  XXXXXXXXXXXXXXXXXXXXXXXXXXXKLVETMTLLKDA KA+ MARGELVGK+ERCKQ VG+DAVSFCEANNTNTT ALDHQPGCNAPATGVEC KAR LVGGR EGA EGSA++AMATTADKSGGE     QDMSAKVAKMQ+ELDGLHAVLDNLSA+RAAAALGGAAA
Sbjct:  320 AVPFEDRVEELEKELSESRRVLKRSNSAASISTILSAVSSSX-XXXXXXXXXXXXXXXXXXXXXXXXXXXKLVETMTLLKDAEKAMRMARGELVGKNERCKQQVGKDAVSFCEANNTNTTVALDHQPGCNAPATGVECGKARPLVGGRGEGAEEGSAIEAMATTADKSGGEGEGQGQDMSAKVAKMQSELDGLHAVLDNLSAKRAAAALGGAAA 532          
BLAST of mRNA_Ecto-sp13_S_contig14704.3597.1 vs. uniprot
Match: D7FMI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI6_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 8.230e-84
Identity = 188/210 (89.52%), Postives = 190/210 (90.48%), Query Frame = 0
Query:    7 DRVEELEKELSESRRVLKRSDSAASISTVLSAVSSSTSXXXXXXXXXXXXXXXXXXXXXXXXXXX-KLVETMTLLKDAAKAIPMARGELVGKSERCKQHVGEDAVSFCEANNTNTTGALDHQPGCNAPATGVECDKARLLVGGREEGAGEGSAMQAMATTADKSGGEXXXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAAALGGAAA 215
            DRVEELEKELSESRRVLKRSDSAASIST LSAVSS   XXXXXXXXXXXXXXXXXXXXXXXX    KLVETMTLLKDA KAI MARGELVGKSERCKQ VGEDAVSFCEAN TN TG LDHQPGC+APATGVEC KAR LV G EEGAGEGSAM+AMATTADKSGGE XXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAAALGGA A
Sbjct:  237 DRVEELEKELSESRRVLKRSDSAASISTALSAVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXKHKDKLVETMTLLKDAEKAIRMARGELVGKSERCKQQVGEDAVSFCEANITNATGGLDHQPGCSAPATGVECGKARPLVSGLEEGAGEGSAMEAMATTADKSGGEGXXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAAALGGAVA 446          
BLAST of mRNA_Ecto-sp13_S_contig14704.3597.1 vs. uniprot
Match: D8LMT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMT9_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.050e-12
Identity = 63/143 (44.06%), Postives = 81/143 (56.64%), Query Frame = 0
Query:   72 KLVETMTLLKDAAKAIPMARGELVGKSERCKQHVGEDAVSFCEA--NNTNTTGALDHQPGCNAPATGVECDKARLLVGGREEGAGEGSAMQAMATTADKSGGEXXXXXQDMSAKVAKMQAELDGLHAVLDNLSAERAAAALGG 212
            +L+E M+LLK+A  A   A+ EL GK E+ ++   +   S   +  N T  TG L H  G  A     E   AR LVG   +G  EG A    A  A+ +GGE      D+SAKVA +QAELD +HA+LDN+SAER AA LGG
Sbjct:  472 QLLEMMSLLKEAEAAKQAAQDELAGKDEKIEELEAKVLASSTSSPPNGTANTGGLHHDSGYTA-----EGGAARSLVG---DGEAEGGAA---AAEAEANGGE------DLSAKVATLQAELDDMHAMLDNVSAERDAA-LGG 596          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14704.3597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KST7_9PHAE8.610e-8788.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMI6_ECTSI8.230e-8489.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMT9_ECTSI2.050e-1244.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..204
NoneNo IPR availableCOILSCoilCoilcoord: 9..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14704contigEcto-sp13_S_contig14704:335..3799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14704.3597.1mRNA_Ecto-sp13_S_contig14704.3597.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14704 335..3799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14704.3597.1 ID=prot_Ecto-sp13_S_contig14704.3597.1|Name=mRNA_Ecto-sp13_S_contig14704.3597.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=240bp
QAVPFEDRVEELEKELSESRRVLKRSDSAASISTVLSAVSSSTSNDGGEG
EGESESESENKSDDVKDKDKDKLVETMTLLKDAAKAIPMARGELVGKSER
CKQHVGEDAVSFCEANNTNTTGALDHQPGCNAPATGVECDKARLLVGGRE
EGAGEGSAMQAMATTADKSGGEGEGQGQDMSAKVAKMQAELDGLHAVLDN
LSAERAAAALGGAAAGREREANGMDLSGKIEAMQAEVQQ*
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