prot_Ecto-sp13_S_contig14670.3576.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14670.3576.1
Unique Nameprot_Ecto-sp13_S_contig14670.3576.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.360e-48
Identity = 81/101 (80.20%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    5 EQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVEGRCK 105
            +QNFSNYSAFHFRSKVLPRMVEEAGHDR           + T  AMFTEPADQSVWWYHHFLLTWADDG DSC DSERYEN+LRAEAATLGELIEVE RCK
Sbjct:  205 KQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDE---LDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCK 302          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.570e-18
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    6 QNFSNYSAFHFRSKVLPRMVEEAGHD---RLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVEGRCK 105
            +NFSNYSAFH+RSK+LP + E  G      L +++          QA FTEP DQS WWYH FL+ WA +        ++Y  +L+ E   + EL+ VE RCK
Sbjct:  189 ENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQE-----LEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCK 286          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A7S2UPE6_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPE6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.030e-14
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    2 TAAEQNFSNYSAFHFRSKVLPRMV---EEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYEN----VLRAEAATLGELIEVE-GRCK 105
            T  + NFSN SAFH+RSK+LP ++   +++    LAK++         Q A+FTEP DQ+ WWYH FLL WA    +   + +  +     +L  EA TL +LIE E  +CK
Sbjct:  311 TKMDANFSNCSAFHYRSKLLPWVLIHSDDSDKLALAKEE-----LELVQNAIFTEPDDQTAWWYHRFLLQWAQPNNNDADNDDNVQKEFCQLLEQEAETLRDLIETEENQCK 417          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A6S8XW41_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8XW41_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.580e-14
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0
Query:    6 QNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVE-GRCK 105
            QNFSN SAFH+RSK+LP ++      RL   +         + A+FTEP DQ+ WWY  F+L+W  D +    D E Y+ +L  E  ++ +L++ E G+CK
Sbjct: 1045 QNFSNGSAFHYRSKLLP-LIHTENESRLTS-EVINEELEIIRNAVFTEPDDQTSWWYFRFILSWMRDESTKTLDDEEYKRILYQEWESIHDLVDAEDGQCK 1143          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A0M0JE27_9EUKA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JE27_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 4.760e-13
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
Query:    2 TAAEQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPT-PPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVEGRCK 105
            T  + NFSNYSA+H+RSK+LP +   AG +  A+            + A FT P D S W+YH +L+     GA +      +E ++RAE   + EL+E+E  CK
Sbjct:  168 TKIQANFSNYSAWHYRSKLLPAVHASAGAEGAAQLGAVLRNELELVRNAFFTAPEDSSAWFYHRWLIAQLAPGAAAALPPAEFEALVRAELQMVDELLELEPECK 272          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A7S1ZUZ6_TRICV (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUZ6_TRICV)

HSP 1 Score: 70.9 bits (172), Expect = 2.130e-12
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 0
Query:    5 EQNFSNYSAFHFRSKVLPRMV-------EEAGHD-----RLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWAD---------------DGADSCCDSE---RYENVLRAEAATLGELIEVEG-RCK 105
            E NFSN SAFH+RSK+LP M+       EE G +       A+ D      +  + A +TEP DQ+ WWYH F+++WA                   D+  + E    + ++L  EA +L +L+E EG RCK
Sbjct:   59 ESNFSNGSAFHYRSKLLPLMLDMRVRESEEGGEEGEEVAATARIDLAKEELDLVRDAAYTEPDDQTAWWYHRFVVSWASPLTLPHLSHAPAPSSSPPDALLEEEDVLAFVDLLEEEAFSLRDLVEAEGGRCK 190          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A7R9U2X8_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.320e-12
Identity = 42/98 (42.86%), Postives = 52/98 (53.06%), Query Frame = 0
Query:    7 NFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVEGRC 104
            NFSNYSAFH RS++L  + E  G D+++         +  QQ   T P DQS WWY+ FLL    D AD     E    +LR E   L EL+EVE  C
Sbjct:  192 NFSNYSAFHERSRILASLAEY-GEDKISTLQQE---LDFVQQITVTAPDDQSAWWYYRFLLAAVTDDAD--IPIEEKLRLLRQEVGRLNELVEVELEC 283          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A3G2RZ20_9BASI (Geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A3G2RZ20_9BASI)

HSP 1 Score: 68.9 bits (167), Expect = 2.170e-11
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 LTAAEQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEVEGRCKVC 107
            LT  EQNFSN+SA+H RSK+LPR+ +    D  A+           QQAM+T+P DQS+W YH +L++  D   ++          L+ +   + EL E+E   K C
Sbjct:  207 LTKIEQNFSNFSAWHNRSKLLPRIWDGEKLDAAARSQQRQAEFELLQQAMYTDPGDQSIWIYHRWLVS-LDPNLET----------LKEQIQVIHELAEMEPESKWC 302          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A5C3E6R1_9BASI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E6R1_9BASI)

HSP 1 Score: 67.8 bits (164), Expect = 2.650e-11
Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 0
Query:    1 LTAAEQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLL-------TWADDGADSCCDSERYENVLRAEAATLGELIEVEGRCKVCACLLA 112
            L   E NFSN+SA+H RSK+LP +    G     +           +QAM+T+P+DQSVW+YH +L+       T  + G  +   S R   VL  E   + EL E+E   K CA  LA
Sbjct:  104 LKKIESNFSNFSAWHQRSKLLPHLWTAKGLGTEQRDAEIDAELELVKQAMYTDPSDQSVWFYHRWLVELLSPSHTQQEQGEPT---SARQIKVLEEEVGVIEELFELEPDSKWCAISLA 219          
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Match: A0A2Z6SNF0_9GLOM (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6SNF0_9GLOM)

HSP 1 Score: 68.6 bits (166), Expect = 2.820e-11
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 0
Query:    2 TAAEQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAMFTEPADQSVWWYHHFLLTWADDGADSCCD----------SERYENVLRAEAATLGELIEVEGRCKVC 107
            T   Q+FSNYSA+H RSK+LP +++E   D L KK          + A +T+P DQS W YH +L+    + + S  D          SER E +L+ E   + EL+E+E   K C
Sbjct:  175 TKINQSFSNYSAWHQRSKLLPILIKEKNLDELEKKKLIDKEFELVKAAFYTDPDDQSAWLYHRWLIGQGSNISTSQMDEEIKDSSIKSSERIE-LLQREINVVRELLELEPDSKFC 289          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14670.3576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI4.360e-4880.20Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA6.570e-1842.72Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S2UPE6_9STRA1.030e-1440.18Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A6S8XW41_9STRA1.580e-1439.60Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0M0JE27_9EUKA4.760e-1337.14Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S1ZUZ6_TRICV2.130e-1234.85Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7R9U2X8_9STRA4.320e-1242.86Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A3G2RZ20_9BASI2.170e-1137.38Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A5C3E6R1_9BASI2.650e-1136.97Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A2Z6SNF0_9GLOM2.820e-1137.07Geranylgeranyl transferase type-2 subunit alpha n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.120coord: 2..112
e-value: 2.4E-22
score: 81.5
NoneNo IPR availablePANTHERPTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITcoord: 4..79
NoneNo IPR availableSUPERFAMILY48439Protein prenylyltransferasecoord: 3..73
IPR032955Geranylgeranyl transferase type-2 subunit alphaPANTHERPTHR11129:SF2GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT ALPHAcoord: 4..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14670contigEcto-sp13_S_contig14670:95..991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14670.3576.1mRNA_Ecto-sp13_S_contig14670.3576.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14670 95..991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14670.3576.1 ID=prot_Ecto-sp13_S_contig14670.3576.1|Name=mRNA_Ecto-sp13_S_contig14670.3576.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
LTAAEQNFSNYSAFHFRSKVLPRMVEEAGHDRLAKKDPTPPYANTTQQAM
FTEPADQSVWWYHHFLLTWADDGADSCCDSERYENVLRAEAATLGELIEV
EGRCKVCACLLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032955RabGGTase_alpha