prot_Ecto-sp13_S_contig14621.3550.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14621.3550.1
Unique Nameprot_Ecto-sp13_S_contig14621.3550.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length502
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14621.3550.1 vs. uniprot
Match: D7FZT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT4_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 1.600e-100
Identity = 318/503 (63.22%), Postives = 321/503 (63.82%), Query Frame = 0 
Query:    1 MSQSRVNLATAKRELAERRDEANLCMVELKHAQEVLAAGGTGPKVLSVTVQEVFGPITVDRVAVRPDASPAQEKVVAQGIPCTFPLDATVESFDLVLMAENDNGAGATKSAAVDQASASKEDSSQLAEAAAVAVAGDGHETDEVVISAEDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EQGNDAEEEFHDASGAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXKEATDEASPVASGTTGDESNANVVDAAADPASXXXXXXXXXXXXXVXXXXVETPAAEGDVAAAAEVDVTPVEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGPVAGDDPETAPAATVAEXXXXXXXXADTGAARASLNGGVGGASPAAAEALGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGAVEVTKGIRFSTSLKAVDSREDDDRIVELSEKLSDAERRVRAAGAMVSNPTPS 502
            MSQSRVNLATAKRELAERRDEANLCMVELKHAQEVLAAGGTGPKVLSV                           VAQGIPCTFPLDA VESFDLVLMAEND+GAGATKSAAVDQAS S+EDSSQLAEAAAVAV GDGHETDEVVISAEDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EQGNDAEEEFHD SGAAAP                                                           V DAA                        E P A    A  AE               XXXXXXXXXXXXXXXXXXXXXXX A GPVAG             XXXXXXXX                     A ALGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGAVEVTKGIRFSTSLKAVDSREDDDRIVELSEKLSDAERRVRAA AM+    PS
Sbjct:    1 MSQSRVNLATAKRELAERRDEANLCMVELKHAQEVLAAGGTGPKVLSV---------------------------VAQGIPCTFPLDAAVESFDLVLMAENDSGAGATKSAAVDQASVSQEDSSQLAEAAAVAVPGDGHETDEVVISAEDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSEQGNDAEEEFHDDSGAAAP-----------------------------------------------------------VADAA------------------------EAPVAGETEAVGAEA---------GQGETXXXXXXXXXXXXXXXXXXXXXXXXAVGPVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGAVEVTKGIRFSTSLKAVDSREDDDRIVELSEKLSDAERRVRAAEAMIKKLQPS 384
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14621.3550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZT4_ECTSI1.600e-10063.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 468..495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14621contigEcto-sp13_S_contig14621:949..4287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14621.3550.1mRNA_Ecto-sp13_S_contig14621.3550.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14621 949..4287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14621.3550.1 ID=prot_Ecto-sp13_S_contig14621.3550.1|Name=mRNA_Ecto-sp13_S_contig14621.3550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=502bp
MSQSRVNLATAKRELAERRDEANLCMVELKHAQEVLAAGGTGPKVLSVTV
QEVFGPITVDRVAVRPDASPAQEKVVAQGIPCTFPLDATVESFDLVLMAE
NDNGAGATKSAAVDQASASKEDSSQLAEAAAVAVAGDGHETDEVVISAED
AAEAVEAEAAAAATATVPDAAEAGEAGVNEVAAAAAATTAAAAGAVSEQG
NDAEEEFHDASGAAAPVADAAEAPVAEETEAVGAEAGQGETAESEPAGEV
GEAKEATDEASPVASGTTGDESNANVVDAAADPASAAAAAAAAAAEEEVA
AAAVETPAAEGDVAAAAEVDVTPVEDGDGDSAAAGLSLDTAAAEAEAAAA
AAEAAVAAAGPVAGDDPETAPAATVAEAAGEVAGEADTGAARASLNGGVG
GASPAAAEALGCSTGTTEVVVPSSELDFKLSQGQWRYLEADSTPVHGDGA
VEVTKGIRFSTSLKAVDSREDDDRIVELSEKLSDAERRVRAAGAMVSNPT
PS
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