prot_Ecto-sp13_S_contig14613.3544.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14613.3544.1
Unique Nameprot_Ecto-sp13_S_contig14613.3544.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length322
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14613.3544.1 vs. uniprot
Match: A0A6H5K265_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K265_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 2.430e-118
Identity = 247/282 (87.59%), Postives = 250/282 (88.65%), Query Frame = 0 
Query:   40 NSQDYARRELAAEIRENEVQPQKFRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARENGFAEGRGDLLEQLERSHRERLALREEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQGLPAGEDVAAEVRDAFAAYVVSAHEQRLVAVARERERAGEAARELSRXLARANEMLAALSKERSIETEVMQDPILNEVAAVPAAAVSSXXENPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSSFWQECGGGQKW 321
            +SQD ARRELAAEIRENEVQPQK RADAAERDLSELRQAAHGWLSAAHALKLEAVAEARENGFAEGRGDLLEQLERSHRERLALREEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQ L AGEDVAAEVR+AFA YVVSAHEQRL AVARERERAGEAAREL  X   ANEML ALSKERSIETEV  DP LN+VAAVPAAAVSS  ENP               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSSFWQECGGGQKW
Sbjct:  187 SSQDDARRELAAEIRENEVQPQKLRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARENGFAEGRGDLLEQLERSHRERLALREEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQELLAGEDVAAEVREAFATYVVSAHEQRLAAVARERERAGEAARELXXXXXXANEMLTALSKERSIETEVRHDPTLNKVAAVPAAAVSSVPENPATTAAFRPSFSTSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSSFWQECGGGQKW 468
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BLAST of mRNA_Ecto-sp13_S_contig14613.3544.1 vs. uniprot
Match: D7G6L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L4_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 2.750e-104
Identity = 216/291 (74.23%), Postives = 221/291 (75.95%), Query Frame = 0 
Query:   31 RASPVFLLNNSQDYARRELAAEIRENEVQPQKFRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARENGFAEGRGDLLEQLERSHRERLALREEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQGLPAGEDVAAEVRDAFAAYVVSAHEQRLVAVARERERAGEAARELSRXLARANEMLAALSKERSIETEVMQDPILNEVAAVPAAAVSSXXENPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATSSSFWQECGGGQKW 321
            RASPV LL+NSQD ARRELAAEIRENEVQPQK RADAAERDLSELRQAAHGWLSAAHALKLEAVAEARE+GFAEGRGDLL +LERSHRERLAL EEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQ L AGEDVA+EVR+AFAAYVVSAHEQRL AVARERERAGEAARELSR LARANEMLAALSK                                                            XXXXXXXXXXXXXXXX LATSSSFWQECGGGQKW
Sbjct:   32 RASPVLLLDNSQDDARRELAAEIRENEVQPQKLRADAAERDLSELRQAAHGWLSAAHALKLEAVAEARESGFAEGRGDLLGKLERSHRERLALSEEVLVARTEAVDAIAAMGEAGAAALVKSRDVWRAEGRAAAEQELLAGEDVASEVREAFAAYVVSAHEQRLAAVARERERAGEAARELSRELARANEMLAALSK----------------------------------------------------------GGXXXXXXXXXXXXXXXXKLATSSSFWQECGGGQKW 264
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14613.3544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K265_9PHAE2.430e-11887.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6L4_ECTSI2.750e-10474.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14613contigEcto-sp13_S_contig14613:3128..4289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14613.3544.1mRNA_Ecto-sp13_S_contig14613.3544.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14613 3128..4289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14613.3544.1 ID=prot_Ecto-sp13_S_contig14613.3544.1|Name=mRNA_Ecto-sp13_S_contig14613.3544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
VSRQHSFDPPTINNSATLRDRPLSTRHPEPRASPVFLLNNSQDYARRELA
AEIRENEVQPQKFRADAAERDLSELRQAAHGWLSAAHALKLEAVAEAREN
GFAEGRGDLLEQLERSHRERLALREEVLVARTEAVDAIAAMGEAGAAALV
KSRDVWRAEGRAAAEQGLPAGEDVAAEVRDAFAAYVVSAHEQRLVAVARE
RERAGEAARELSRELARANEMLAALSKERSIETEVMQDPILNEVAAVPAA
AVSSAAENPSTTAAIRPSFSSSAPTTAAISQPIEGGAAAAAAAATAVAAA
AAVKLATSSSFWQECGGGQKW*
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