prot_Ecto-sp13_S_contig14608.3538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14608.3538.1
Unique Nameprot_Ecto-sp13_S_contig14608.3538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14608.3538.1 vs. uniprot
Match: D8LDK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK9_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 5.740e-113
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 0 
Query:   15 QAVTYALKEEDKHRCVHGHAWVTPDKGGDRHDEESCNSLKASGKHNSILEEYYDRMAESAIKRLGDALWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGQEELERLGKHCVDVING 180
            +AVTYA  EEDKHRCV+GHAWV P+KGGD HDEESCNSLKASGKHN+ILEEYYDRMAESAIKRLGD LWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAG+EELERLGKHCV+VING
Sbjct:  121 EAVTYAHNEEDKHRCVYGHAWVKPEKGGDHHDEESCNSLKASGKHNAILEEYYDRMAESAIKRLGDGLWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGEEELERLGKHCVNVING 286
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BLAST of mRNA_Ecto-sp13_S_contig14608.3538.1 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 8.420e-48
Identity = 82/158 (51.90%), Postives = 106/158 (67.09%), Query Frame = 0 
Query:   29 CVHGHAWVTPDKGGDRHDEE------SCNSLKASGKHNSILEEYYDRMAESAIKRLGDALWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGQEELERLGKHCVDVING 180
               GH  + PD   +R   +      +C ++KASG+   +   Y++R A++AI+R+  ALWVGVTER +E+ CLLFLTLGK  + M  +R K PRPI+VWHE A  K   YD+ADW+VF AAND LDLR+WTARERLK AG+EE  RLG HC  V+ G
Sbjct:  268 AAEGHPCIRPDPEFNRWRVDDTDVGGTCKAIKASGQDADVWAAYFERTADAAIRRMEGALWVGVTERMEESLCLLFLTLGKKESEMPQHRLKTPRPITVWHEKAKEKAASYDRADWRVFEAANDFLDLRLWTARERLKSAGEEERARLGDHCFQVLAG 425
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14608.3538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDK9_ECTSI5.740e-11393.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCA8_9PHAE8.420e-4851.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14608contigEcto-sp13_S_contig14608:1631..3759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14608.3538.1mRNA_Ecto-sp13_S_contig14608.3538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14608 914..4265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14608.3538.1 ID=prot_Ecto-sp13_S_contig14608.3538.1|Name=mRNA_Ecto-sp13_S_contig14608.3538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MTLAGGPFEMGMSVQAVTYALKEEDKHRCVHGHAWVTPDKGGDRHDEESC
NSLKASGKHNSILEEYYDRMAESAIKRLGDALWVGVTERSDEADCLLFLT
LGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDL
RIWTARERLKHAGQEELERLGKHCVDVINGL*
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