prot_Ecto-sp13_S_contig1453.3484.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1453.3484.1
Unique Nameprot_Ecto-sp13_S_contig1453.3484.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length852
Homology
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 1265 bits (3273), Expect = 0.000e+0
Identity = 739/856 (86.33%), Postives = 759/856 (88.67%), Query Frame = 0
Query:    1 MDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKVMTRGSGDGFSAAPAAKTVFSADPNLSPVSGEMGVGRSHNRERRAARXXXXXXXXXDSEKGRGEGGRLWSEDDGAADAXXXXXXEAARVRDGAQLRIKRREERERAERERQAKYFASLDGQGGDAVAGAGASDGGLDDIFGDYFSPKKSSTPPSSSTVAPQPKQRFAKNPSPAASTSGWDQLPPPASSSTSGGKLSERRNDYGSNLPINLSEREAEGDDGWESSGGGDYGGGRRQGRG--GRDGGYQDFSEPVSEGRFGRQAQQQQ-GKLGNGRGGDDFGLRGRGGGGRGSAAADYGGGRG-RVVDKSIWDADRWESTGSTAWINAGEGDGSAXXXXXXXXSLPSWKVPKAEQETAKANSAPVPDWLPRQGGLGSESRRGVAPLPEGIDTSVKKLGVKGLEAMLKDKFSKMKDGVFTAEDDEAEFYDPDDEGFERLVDGEQLPLVESEDDVVGSVDVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGGGFRMRSPSRAXXXXXXXXXXXXXXGSTGGGRDASPAVDDYDKDGSSGNKSASRTKGGRGDDGGGSVGGDDIAFGRGVAEGEDVAVVSEDRKQEQDGVTGKVGKKDKTTKSQAVEKKPTYTAINIADMETLEQQASFSFHDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGG 852
            MDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKVMTRG GDGFSAAPAAKTVFSADPNLSPVSGE+GVGRSHNRERRAAR   XXXXXX  EKGRGE GRLWSEDDGAADA XXXXXEAARVRDGAQLRI+RREERERAERERQA+YFAS+DGQGGDA  GAGASDGGLDDIFGDYFSPKKSSTPPSSS VAPQPKQRFA+NPSPAA+TSGWDQLP      TSG K  ERR+DYGSNL  N   REAE DDGWES   GDYG GR       GRDGGYQD+SEPVSEGRFGRQAQQQQ G+  NGRGGDDFG RGRG                 RVVDKSIWDADRWESTGSTAWINAGEGDGSAXXXXXXXXSLPSWKVPKAEQETAKANSAPVPDWLPRQGGLGSESRRGVAPLPEGIDTSVKKLGVKGLEAMLKDKFSK KDGVF AEDDEAEFYDPDDEGFE+LVDGEQLPLVESEDDVVGSVDVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGGGFRMRSPSRA XXXXXXX      GSTGGGRDASPAVDDYD+DGSSGNKSASR+KG            + IA           AV+SE+RK+EQDGV  K+GKKDK TKSQAVE+KPTYTAINIADMETLEQQASFSF DLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPD+NALQAVVVAPGRELASQIFSVCEKLIQGTGLRS+MVIGGANALRQVER KKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATP G
Sbjct:  163 MDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKVMTRGGGDGFSAAPAAKTVFSADPNLSPVSGELGVGRSHNRERRAARREQXXXXXXXXEKGRGEEGRLWSEDDGAADAAXXXXXEAARVRDGAQLRIQRREERERAERERQAEYFASIDGQGGDA--GAGASDGGLDDIFGDYFSPKKSSTPPSSSAVAPQPKQRFAQNPSPAAATSGWDQLPXXXXXXTSGSKRPERRDDYGSNLRRNPL-REAERDDGWESVVDGDYGRGRXXXXXXXGRDGGYQDYSEPVSEGRFGRQAQQQQQGRXXNGRGGDDFGPRGRGXXXXXXXXXXXXXXXXXRVVDKSIWDADRWESTGSTAWINAGEGDGSAXXXXXXXXSLPSWKVPKAEQETAKANSAPVPDWLPRQGGLGSESRRGVAPLPEGIDTSVKKLGVKGLEAMLKDKFSKTKDGVFAAEDDEAEFYDPDDEGFEKLVDGEQLPLVESEDDVVGSVDVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGGGFRMRSPSRAAXXXXXXXTT----GSTGGGRDASPAVDDYDEDGSSGNKSASRSKGSXXXXXXXXXXXNGIAVXXXXXXXXXXAVLSEERKREQDGVAEKLGKKDKKTKSQAVERKPTYTAINIADMETLEQQASFSFRDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDSNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSSMVIGGANALRQVERFKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPRG 1011          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.530e-44
Identity = 157/490 (32.04%), Postives = 225/490 (45.92%), Query Frame = 0
Query:  431 EGIDTSVKKLGVKGLEAMLKDKFSKMKDGVFTAEDDEAEFYDPDDEGFERLVDGEQLPLVESEDDVVGSVDVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGGGFRMRSPSRAXXXXXXXXXXXXXXGSTGGGRDASPAVDDYDKDGSSGNKSASRTKGGRGDDGGGSVGGDDIAFGRGVAEGEDVAVVSEDRKQEQDGVTGKVGKKDKTTKSQAVEKKPTYTA-INIADMETLEQQASFSFHDLGIQDRTVLKNIKKLGIDSPTDVQVSA-----------------IRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQV--------------------------------------------------------ERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIM 846
            +G+D S+ KL ++ LEA L++KF         A+ D+ +FYD DDEG+E    G+  P    E+ + G+    A            +  AP      VV  +E  A  GGFRMR                           A  A +D  +DGS    S+ +  G                  + V +GE  A V+  +K+E                  A E    Y + + +A + T++   S +F +LG+ D  +L N+  +G++ PT VQ SA                 +  LL    DV+IHAHTGSGKTLA+LLPL+   D D +++QAVVVAPGREL SQIF+V ++L++GTG+R+ M+IGGAN  RQV                                                        +R+K  KP ++I TPGR+CEL  +++R+KL  V+ VVLDEVD L+RPPYD+EID I+
Sbjct:  301 QGLDRSMTKLSLEELEARLRNKF-------VDAKKDDQDFYDKDDEGYE----GDGPP---PEEPLEGTAVTKAGESGAEADSXXXEEAAPPS----VVEIAEVAAKEGGFRMR---------------------------ARQAPEDGYEDGSESRGSSKKKSG------------------KVVGQGEWEAEVAAAKKKE------------------AEEFDVEYLSHLTVASLGTVDPTTSGTFEELGVTDVKLLDNLAGMGLERPTHVQASAAFVVLCIENWRKLQASALSELLGGTNDVVIHAHTGSGKTLAFLLPLLQRIDTDDDSVQAVVVAPGRELGSQIFAVAQQLVEGTGIRTQMLIGGANVNRQVYAHVGISQAVALHGARHRPAARNFNSDYHLQATGTTSTVWIVNSQSPIIDDPPRHIDRLKANKPHVLIGTPGRVCELALEKKRVKLANVKFVVLDEVDTLMRPPYDEEIDQII 709          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A7S2XV29_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV29_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.230e-40
Identity = 86/195 (44.10%), Postives = 127/195 (65.13%), Query Frame = 0
Query:  658 YTAINIADMETLEQ--QASFSFHDLGIQDRT----VLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIM 846
            Y   N+  +E+L +   A+ SF + G+  +     +L N++++GI  PT VQ +A++ LL E RD ++HA TGSGKTLAYLLP +   DPD + +Q VVV P REL +Q+ +V  +L+ GTG+    +IGGAN  RQ+E +KK +PQ+V+ TPGRL +LV +  R+++G     VLDEVD LL   +  E+D +M
Sbjct:  125 YDRDNVLSLESLGEISVAAGSFEEAGMTPQNSPAGMLGNLREMGILQPTSVQAAALQSLLVEGRDGVLHAPTGSGKTLAYLLPAVCKVDPDRDVVQVVVVVPSRELGAQVANVLNQLLPGTGITPLSLIGGANINRQIENLKKKRPQVVVGTPGRLADLVIEYGRLRVGHATVAVLDEVDMLLESQFRGEVDHLM 319          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A0G4F225_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F225_VITBC)

HSP 1 Score: 158 bits (400), Expect = 2.340e-36
Identity = 89/205 (43.41%), Postives = 132/205 (64.39%), Query Frame = 0
Query:  670 EQQASFSFHDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIA-------------ATDPDTN---------ALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATPGG 852
            E+Q  F+  D+GI +  +++N+++ GI +PT  Q+ AI  +L  D D+IIHAHTGSGKTLAYLLPL+              ATD + N           + ++VAPGREL +QI  VC  +++GTGLR  M++GGAN   Q+E++K   P++V+ TPGRL + V DRR++ L  V+ +VLDEVD L+R PY+ +++++M   P G
Sbjct:  359 EKQRRFTDPDIGIGNAMMVENLRRGGILNPTHTQIKAIPRILQGD-DLIIHAHTGSGKTLAYLLPLLERMLNEHGATAATNATDINGNRGGVQGRRRGPELLIVAPGRELVAQIAKVCRVVLEGTGLRCAMLLGGANPKYQLEQLKG-GPEVVVGTPGRLYDFVLDRRKVDLSRVKYLVLDEVDQLIRDPYEGQLESLMATIPKG 561          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A7S4BCL2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCL2_CHRCT)

HSP 1 Score: 156 bits (394), Expect = 2.540e-36
Identity = 81/166 (48.80%), Postives = 115/166 (69.28%), Query Frame = 0
Query:  673 ASFSFHDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPY 838
            +S SF  LG+    V++N+K   I +P  +Q++A   + S  RDV+IHAHTGSGKTLA+LLPLI   DP +   QA+V++P RELA Q + V E L++ + LR   + GGAN  RQ+ER++K +PQ++I T GR+CEL F+ +++KL  VR +VLDEVD  LR P+
Sbjct:  126 SSNSFEGLGVTVPVVIENLKAAFITTPNALQLAAFEPIAS-GRDVLIHAHTGSGKTLAFLLPLIEQLDPSSKEPQALVLSPSRELAYQTYRVAEMLLKDSPLRVVSLAGGANPSRQIERVRKERPQLLIGTAGRVCELNFEAKKLKLQRVRHLVLDEVDEALRTPH 290          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A7S3HFU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFU4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.690e-36
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 0
Query:  700 TDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATP 850
            T +Q +AI  L    ++V++ A TGSGKTLAYLLPL+   DP    +QA+++AP REL  QI  V   L QGT  R   +IGGAN   Q  R++  +PQI+IATPGRL E+VF   +++LG V+ VV+DEVD++++ PY  E++ ++ ATP
Sbjct:    1 TQIQAAAIPAL-HRGQNVVLQAQTGSGKTLAYLLPLLKVVDPSVKQVQAIILAPSRELVQQIGQVAASLFQGTDYRVQTLIGGANIHHQTIRLRDDRPQILIATPGRLAEIVFKLEKLRLGRVKVVVVDEVDSMMQEPYIGEVETLLQATP 150          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A4D9D1Y7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1Y7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.700e-34
Identity = 72/162 (44.44%), Postives = 115/162 (70.99%), Query Frame = 0
Query:  687 VLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDA 848
            +L N++K+G+ +PT +Q +AI  LL  + DVI+H++TGSGKTLAYLLPL++  DP  +  Q +V+AP RELA+QI SV E+L + T +    +IGGA+  RQ+E+++  +PQ+++ TPGR+ E+V ++R+ ++G    +VLDEVD LL   Y  ++  ++ A
Sbjct:   74 LLANLQKMGLTAPTLIQAAAIPALLKGE-DVILHSYTGSGKTLAYLLPLLSRLDPAQSHTQLLVIAPSRELAAQIASVAEELTEDTDINVVSLIGGASQQRQIEKLRWERPQVLVGTPGRVAEMVLEKRKARIGRAEMLVLDEVDMLLDDSYHGDLRMLVQA 234          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A0G4FYR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYR2_9ALVE)

HSP 1 Score: 149 bits (375), Expect = 5.210e-33
Identity = 82/192 (42.71%), Postives = 118/192 (61.46%), Query Frame = 0
Query:  661 INIADMETLEQQASFSFHDLGIQDRTVLKNIKKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRR--RMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATP 850
            I+ + M  LE     SF D GI D ++L+ +++ G+  PT+ Q   +  LLS   DV+  +HTGSGKTLA+LLPL+   DP   + Q VV+ P RELA Q+  V  +L + + L   ++IGGAN  RQ++ I+K KPQI++ TPGRL +    R   R++ G +R  VLDEVDALLR P++  +  +M   P
Sbjct:  458 IDFSRMGFLEPDKGKSFEDFGIVDPSLLEALREGGVRHPTEAQ-RRVMPLLSSGHDVVCESHTGSGKTLAFLLPLLQKIDPSVRSPQMVVIVPSRELAIQVGRVAHQLTEKSELGVGLLIGGANPERQMQAIRKEKPQILVGTPGRLYDAFIGRSGSRLRAGAIRYAVLDEVDALLREPFNHHLTELMHTLP 648          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A7S0BFW5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFW5_9RHOD)

HSP 1 Score: 137 bits (345), Expect = 5.680e-32
Identity = 72/148 (48.65%), Postives = 104/148 (70.27%), Query Frame = 0
Query:  699 PTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIM 846
            PT +Q + +   L E RD++I +HTG+GKT+A+LLP+I   + D++ +QA +VAP RELA QI + C+KLI+   +RS  +IGGAN  RQVE++KK+KP IV+ TPGRL EL  + R++KLG VR  V+DEVD  L   +   I +++
Sbjct:  149 PTKIQSAVVPWAL-EGRDIVICSHTGTGKTMAFLLPIIEQIEEDSDEIQATIVAPTRELAMQISAECDKLIRRMDVRSIPLIGGANPARQVEKMKKLKPHIVVGTPGRLAELC-ESRKLKLGSVRMTVVDEVDQCLAQGFIDTIGSLI 294          
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Match: A0A1Q9PH19_9BACI (RNA helicase n=2 Tax=Bacillus sp. MRMR6 TaxID=1928617 RepID=A0A1Q9PH19_9BACI)

HSP 1 Score: 137 bits (346), Expect = 1.830e-31
Identity = 73/158 (46.20%), Postives = 113/158 (71.52%), Query Frame = 0
Query:  692 KKLGIDSPTDVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVVVAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIVIATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDAT 849
            +K G ++PT++QV+AI  L+ E +D+I  + TG+GKTLAYLLPL+   + D+ +LQAVV+A  +EL  Q+F   +K  +G+G+R T +IGGAN +RQ+E++KK +P ++ ATPGRL EL+  ++++K+  VR VVLDE D LL P +   +  I+ +T
Sbjct:   20 EKSGFETPTNIQVAAIP-LVLEGKDIIAESPTGTGKTLAYLLPLLNQIENDSQSLQAVVLASSQELVMQVFQEFQKWSEGSGIRGTSIIGGANVVRQLEKLKK-RPHVIFATPGRLFELI-KQKKVKMHEVRMVVLDEGDQLLIPEHLNTVQTIVKST 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1453.3484.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S8_ECTSI0.000e+086.33DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835Z5P1_9STRA1.530e-4432.04Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XV29_9STRA3.230e-4044.10Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A0G4F225_VITBC2.340e-3643.41Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S4BCL2_CHRCT2.540e-3648.80Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3HFU4_9STRA3.690e-3647.68Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9D1Y7_9STRA3.700e-3444.44Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A0G4FYR2_9ALVE5.210e-3342.71Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0BFW5_9RHOD5.680e-3248.65Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A1Q9PH19_9BACI1.830e-3146.20RNA helicase n=2 Tax=Bacillus sp. MRMR6 TaxID=1928... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 695..852
e-value: 6.3E-22
score: 88.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 708..852
score: 20.009
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 700..849
e-value: 2.3E-34
score: 118.7
NoneNo IPR availableGENE3D3.40.50.300coord: 628..851
e-value: 5.9E-52
score: 178.5
NoneNo IPR availablePANTHERPTHR24031:SF572DEAD-BOX ATP-DEPENDENT RNA HELICASE 40coord: 642..834
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 642..834
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 675..704
score: 6.683
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 667..850

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1453contigEcto-sp13_S_contig1453:9736..16778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1453.3484.1mRNA_Ecto-sp13_S_contig1453.3484.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1453 8808..16778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1453.3484.1 ID=prot_Ecto-sp13_S_contig1453.3484.1|Name=mRNA_Ecto-sp13_S_contig1453.3484.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=852bp
MDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKV
MTRGSGDGFSAAPAAKTVFSADPNLSPVSGEMGVGRSHNRERRAARREQQ
RREERDSEKGRGEGGRLWSEDDGAADAAAAAAAEAARVRDGAQLRIKRRE
ERERAERERQAKYFASLDGQGGDAVAGAGASDGGLDDIFGDYFSPKKSST
PPSSSTVAPQPKQRFAKNPSPAASTSGWDQLPPPASSSTSGGKLSERRND
YGSNLPINLSEREAEGDDGWESSGGGDYGGGRRQGRGGRDGGYQDFSEPV
SEGRFGRQAQQQQGKLGNGRGGDDFGLRGRGGGGRGSAAADYGGGRGRVV
DKSIWDADRWESTGSTAWINAGEGDGSAGGGGSGGGSLPSWKVPKAEQET
AKANSAPVPDWLPRQGGLGSESRRGVAPLPEGIDTSVKKLGVKGLEAMLK
DKFSKMKDGVFTAEDDEAEFYDPDDEGFERLVDGEQLPLVESEDDVVGSV
DVGAAVQDFRGAVRYDDPNAPRPKGLGVVARSEAEAAGGGFRMRSPSRAA
ATAAAVAAAAATTGSTGGGRDASPAVDDYDKDGSSGNKSASRTKGGRGDD
GGGSVGGDDIAFGRGVAEGEDVAVVSEDRKQEQDGVTGKVGKKDKTTKSQ
AVEKKPTYTAINIADMETLEQQASFSFHDLGIQDRTVLKNIKKLGIDSPT
DVQVSAIRGLLSEDRDVIIHAHTGSGKTLAYLLPLIAATDPDTNALQAVV
VAPGRELASQIFSVCEKLIQGTGLRSTMVIGGANALRQVERIKKVKPQIV
IATPGRLCELVFDRRRMKLGMVRTVVLDEVDALLRPPYDQEIDAIMDATP
GG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase