prot_Ecto-sp13_S_contig14526.3479.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14526.3479.1
Unique Nameprot_Ecto-sp13_S_contig14526.3479.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14526.3479.1 vs. uniprot
Match: D8LHS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS2_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.560e-34
Identity = 72/99 (72.73%), Postives = 80/99 (80.81%), Query Frame = 0 
Query:    1 DEGVEEGQDKETSKEQVKTEVKVDGVLVDTPFQFPFPVVAEKPEVKSECVQDGAASKVPHAKNEDGHLSAGAPHMKKAKTTTDEGVEEGQDKETSKEQV 99
            +EG EEGQD ET KEQVKTEVK DGVL D PFQFPFPV AEKP VKSECVQDG +SKVP+ K E G++SAGA HMK AK TT++GV EGQD  T KEQ+
Sbjct:  316 EEGKEEGQDIETGKEQVKTEVKFDGVLADAPFQFPFPVAAEKPAVKSECVQDGTSSKVPNVKKEGGNVSAGASHMK-AKKTTEQGVAEGQDIGTGKEQM 413
[Close]
BLAST of mRNA_Ecto-sp13_S_contig14526.3479.1 vs. uniprot
Match: D8LHS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.150e-18
Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:   15 EQVKTEVKVDGVLVDTPFQFPFPVVAEKPEVKSECVQDGAASKVPHAKNEDGHLSAGAPHMK 76
            E VKTEVKV GVL D PFQFPFPV  EKP VKSECVQDGA+SKVP  K E  ++SAGA H+K
Sbjct:  878 ETVKTEVKVHGVLADAPFQFPFPVATEKPAVKSECVQDGASSKVPKVKKEGRNVSAGASHIK 939
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14526.3479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHS2_ECTSI3.560e-3472.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHS0_ECTSI1.150e-1872.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14526contigEcto-sp13_S_contig14526:299..862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14526.3479.1mRNA_Ecto-sp13_S_contig14526.3479.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14526 299..862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14526.3479.1 ID=prot_Ecto-sp13_S_contig14526.3479.1|Name=mRNA_Ecto-sp13_S_contig14526.3479.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
DEGVEEGQDKETSKEQVKTEVKVDGVLVDTPFQFPFPVVAEKPEVKSECV
QDGAASKVPHAKNEDGHLSAGAPHMKKAKTTTDEGVEEGQDKETSKEQVG
GRGCLA*
back to top