prot_Ecto-sp13_S_contig14515.3471.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14515.3471.1
Unique Nameprot_Ecto-sp13_S_contig14515.3471.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A6H5KFS2_9PHAE (DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFS2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.490e-25
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV
Sbjct:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: UPI000A2A80C7 (DNA topoisomerase 2-alpha-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A80C7)

HSP 1 Score: 82.8 bits (203), Expect = 2.640e-19
Identity = 35/50 (70.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    3 QEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            Q MWVYD++ D+IV + +T+VPGLYKIFDEI+VNAADNKQRD NMS +K+
Sbjct:   57 QSMWVYDDILDAIVSKEITYVPGLYKIFDEILVNAADNKQRDANMSTIKI 106          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A6H5HFM0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HFM0_9HEMI)

HSP 1 Score: 77.4 bits (189), Expect = 7.910e-18
Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    5 MWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            MWVYD VA+S+V+R +T+VPGLYKIFDEI+VNAADNKQRD  M+ +K+
Sbjct:    1 MWVYDTVAESMVQRDITYVPGLYKIFDEILVNAADNKQRDPKMNCIKI 48          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: UPI001EAFF0EE (DNA topoisomerase 2-alpha-like isoform X1 n=5 Tax=Haliotis TaxID=6452 RepID=UPI001EAFF0EE)

HSP 1 Score: 83.2 bits (204), Expect = 2.390e-17
Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            ++Q MWVYDEV D++V+R +TFVPGLYKIFDEI+VNAADNKQRD +M+ LK+
Sbjct:   95 VTQAMWVYDEVTDTMVQREITFVPGLYKIFDEIMVNAADNKQRDPSMNCLKI 146          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A1E7F6K6_9STRA (DNA topoisomerase 2 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6K6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.080e-17
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            M+++M++YDEV D+I+ + +T+ PGLYKIFDEIIVNAADNKQRDENM +L V
Sbjct:   30 MTEQMFIYDEVEDAIINKTITYTPGLYKIFDEIIVNAADNKQRDENMDRLDV 81          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A6P8H7T6_ACTTE (DNA topoisomerase 2 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H7T6_ACTTE)

HSP 1 Score: 81.6 bits (200), Expect = 8.300e-17
Identity = 35/52 (67.31%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            + Q MWVYD+V ++IV + +T+VPGLYKIFDEI+VNAADNKQRD NMS +K+
Sbjct:   59 LKQTMWVYDDVLEAIVSKEITYVPGLYKIFDEILVNAADNKQRDPNMSVIKI 110          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A210Q0Z0_MIZYE (DNA topoisomerase 2 n=4 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210Q0Z0_MIZYE)

HSP 1 Score: 80.1 bits (196), Expect = 2.890e-16
Identity = 33/52 (63.46%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            ++Q MWVYD++ + +V+R +TFVPGLYKIFDEI+VNA+DNKQRD NM+ +K+
Sbjct:   78 VTQSMWVYDDIQEKMVQREITFVPGLYKIFDEILVNASDNKQRDPNMNCIKI 129          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A6J1W185_9SAUR (DNA topoisomerase 2-alpha-like n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1W185_9SAUR)

HSP 1 Score: 75.9 bits (185), Expect = 3.910e-16
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            ++Q+MWV+DE  + +  R VTFVPGLYKIFDEI+VNAADNKQRDENMS +KV
Sbjct:   49 VTQQMWVFDE-DEGLNCREVTFVPGLYKIFDEILVNAADNKQRDENMSCIKV 99          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A146M5H1_LYGHE (DNA topoisomerase 2 n=4 Tax=Mirini TaxID=236659 RepID=A0A146M5H1_LYGHE)

HSP 1 Score: 79.7 bits (195), Expect = 3.950e-16
Identity = 33/52 (63.46%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            ++++MWVYD  A+++V+R +T+VPGLYKIFDEI+VNAADNKQRD NM+ +K+
Sbjct:   45 VTEQMWVYDTAAETMVQREITYVPGLYKIFDEILVNAADNKQRDANMNCIKI 96          
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Match: A0A7R8ZRI8_9CRUS (DNA topoisomerase 2 n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8ZRI8_9CRUS)

HSP 1 Score: 79.3 bits (194), Expect = 5.400e-16
Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKLKV 52
            ++Q MWVYD + + +V R +TFVPGLYKIFDEI+VNAADNKQRD++M  +KV
Sbjct:   74 VTQTMWVYDNILEKMVNREITFVPGLYKIFDEILVNAADNKQRDKSMDMIKV 125          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14515.3471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS2_9PHAE2.490e-25100.00DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
UPI000A2A80C72.640e-1970.00DNA topoisomerase 2-alpha-like n=1 Tax=Exaiptasia ... [more]
A0A6H5HFM0_9HEMI7.910e-1870.83Uncharacterized protein (Fragment) n=1 Tax=Nesidio... [more]
UPI001EAFF0EE2.390e-1771.15DNA topoisomerase 2-alpha-like isoform X1 n=5 Tax=... [more]
A0A1E7F6K6_9STRA6.080e-1767.31DNA topoisomerase 2 (Fragment) n=1 Tax=Fragilariop... [more]
A0A6P8H7T6_ACTTE8.300e-1767.31DNA topoisomerase 2 n=2 Tax=Actinia tenebrosa TaxI... [more]
A0A210Q0Z0_MIZYE2.890e-1663.46DNA topoisomerase 2 n=4 Tax=Mizuhopecten yessoensi... [more]
A0A6J1W185_9SAUR3.910e-1671.15DNA topoisomerase 2-alpha-like n=1 Tax=Notechis sc... [more]
A0A146M5H1_LYGHE3.950e-1663.46DNA topoisomerase 2 n=4 Tax=Mirini TaxID=236659 Re... [more]
A0A7R8ZRI8_9CRUS5.400e-1665.38DNA topoisomerase 2 n=1 Tax=Cyprideis torosa TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 1..52
e-value: 3.7E-17
score: 64.6
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 3..52
NoneNo IPR availablePANTHERPTHR10169DNA TOPOISOMERASE/GYRASEcoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14515contigEcto-sp13_S_contig14515:1881..2036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14515.3471.1mRNA_Ecto-sp13_S_contig14515.3471.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14515 1881..2054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14515.3471.1 ID=prot_Ecto-sp13_S_contig14515.3471.1|Name=mRNA_Ecto-sp13_S_contig14515.3471.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
MSQEMWVYDEVADSIVKRAVTFVPGLYKIFDEIIVNAADNKQRDENMSKL
KV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf