prot_Ecto-sp13_S_contig14497.3457.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14497.3457.1
Unique Nameprot_Ecto-sp13_S_contig14497.3457.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14497.3457.1 vs. uniprot
Match: A0A6H5JGV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV5_9PHAE)

HSP 1 Score: 546 bits (1408), Expect = 1.390e-189
Identity = 289/317 (91.17%), Postives = 295/317 (93.06%), Query Frame = 0 
Query:    1 CNFHIATATVGEAVNLTSLRELLDLVHHSVLAVGPTALPKLLDADVIGIALRGAESPNTHVAVVCYRILTVLSQNKHVAQRMSRDPAIRAVLVGELRRQVKGWNHAGSGADDDHEAEDEKQQRRGGLADRGEGVTTAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEPGAAGLNRRFGARGGSGRRTAAGEDEEDEVPWPFRSLYGENNYEGAAGYAHGXXXXXXXXXIASVGGGISGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLETAAASSLREISHHPELVGLLLRR 317
            CNFHIATAT+GEAVNLTSL ELLDLVHHSVLAVGPTALPKLLDA VIGIALRGAESPNTHVAVVCYRILTVLSQN+HVA+RMSRDPAIRAVL+GELRRQVKGWNHAGSGADDDHEAE EKQQR GGLAD GEG T AARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSS+RRSTAEEPGAAGLNRRFGA G SG RTAAGEDEEDEVPWPFR LYGENNYEGAAGYA+G         IASVGGGISGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLE AAASSL EISHHPELVGLLLRR
Sbjct:  134 CNFHIATATIGEAVNLTSLLELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVAVVCYRILTVLSQNRHVARRMSRDPAIRAVLIGELRRQVKGWNHAGSGADDDHEAEGEKQQRMGGLADGGEGATAAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSKRRSTAEEPGAAGLNRRFGAGGVSGGRTAAGEDEEDEVPWPFRFLYGENNYEGAAGYAYGGGNEDDDTIIASVGGGISGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLEAAAASSLLEISHHPELVGLLLRR 450
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BLAST of mRNA_Ecto-sp13_S_contig14497.3457.1 vs. uniprot
Match: D7G608_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G608_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.510e-126
Identity = 208/237 (87.76%), Postives = 209/237 (88.19%), Query Frame = 0 
Query:   82 MSRDPAIRAVLVGELRRQVKGWNHAGSGADDDHEAEDEKQQRRGGLADRGEGVTTAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEPGAAGLNRRFGARGGSGRRTA-AGEDEEDEVPWPFRSLYGENNYEGAAGYAHGXXXXXXXXXIASVGGGISGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLETAAASSLREISHHPELVGLLLRR 317
            MSRDP IRAVLVGELRRQVKGWNHAGSGADDDHEAE EKQQRR GLAD GEG T AARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEP AAGLN RFGA  GSG RTA AGEDEEDEVPWPFR LYGENNYEGAAGYAH            SVGG +SGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLE AAASSLREISHH ELVGLLLRR
Sbjct:    1 MSRDPVIRAVLVGELRRQVKGWNHAGSGADDDHEAEGEKQQRRDGLADGGEGATAAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEPEAAGLNWRFGAGVGSGGRTAVAGEDEEDEVPWPFRFLYGENNYEGAAGYAHDGGNEDDDTITPSVGGVVSGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLEAAAASSLREISHHSELVGLLLRR 237
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BLAST of mRNA_Ecto-sp13_S_contig14497.3457.1 vs. uniprot
Match: D7G609_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G609_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 6.030e-29
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 
Query:    1 CNFHIATATVGEAVNLTSLRELLDLVHHSVLAVGPTALPKLLDADVIGIALRGAESPNTHVAVVC 65
            CNFHIATATVGEAVNLTSL+ELLDLVHHSVLAVGPTALPKLLDA VIGIALRGAESPNTHV+  C
Sbjct:  169 CNFHIATATVGEAVNLTSLQELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVSKGC 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14497.3457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGV5_9PHAE1.390e-18991.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G608_ECTSI1.510e-12687.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G609_ECTSI6.030e-2992.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14497contigEcto-sp13_S_contig14497:1..3106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14497.3457.1mRNA_Ecto-sp13_S_contig14497.3457.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14497 1..3106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14497.3457.1 ID=prot_Ecto-sp13_S_contig14497.3457.1|Name=mRNA_Ecto-sp13_S_contig14497.3457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
CNFHIATATVGEAVNLTSLRELLDLVHHSVLAVGPTALPKLLDADVIGIA
LRGAESPNTHVAVVCYRILTVLSQNKHVAQRMSRDPAIRAVLVGELRRQV
KGWNHAGSGADDDHEAEDEKQQRRGGLADRGEGVTTAARPPPATIVVDPI
HLTLTLETLSNVMRASRRDINSSRRRSTAEEPGAAGLNRRFGARGGSGRR
TAAGEDEEDEVPWPFRSLYGENNYEGAAGYAHGGGNDDDDTIIASVGGGI
SGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEVLETAAASS
LREISHHPELVGLLLRR
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