prot_Ecto-sp13_S_contig14481.3447.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14481.3447.1
Unique Nameprot_Ecto-sp13_S_contig14481.3447.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length170
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14481.3447.1 vs. uniprot
Match: D7FS34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS34_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.300e-29
Identity = 67/109 (61.47%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:   15 MAQISRQEFRDDVLASQTAHLGVASRASFFDDTGSGGFGGSGKDSSDAESGDSEYNFKIAIIGPGGLGGAMLRHLKDLGDVETALIACDERGGIIRHTSPVGPIRSISG 123
            MA+ S QEF  DVLA   A LGVASR +F DDTGSG                  Y++K+AIIGPG    AMLRHLKDLGDVET LIACD RGGIIRH+SPVGPIR  SG
Sbjct:    1 MAEFSAQEFEGDVLAGAMARLGVASRKNFSDDTGSGXXXXXXXXXXXXXXXXXXYSYKVAIIGPGXXXXAMLRHLKDLGDVETVLIACDGRGGIIRHSSPVGPIRGTSG 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14481.3447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS34_ECTSI2.300e-2961.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14481contigEcto-sp13_S_contig14481:1768..2863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14481.3447.1mRNA_Ecto-sp13_S_contig14481.3447.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14481 416..3183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14481.3447.1 ID=prot_Ecto-sp13_S_contig14481.3447.1|Name=mRNA_Ecto-sp13_S_contig14481.3447.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
MQRVFNHSRASSSIMAQISRQEFRDDVLASQTAHLGVASRASFFDDTGSG
GFGGSGKDSSDAESGDSEYNFKIAIIGPGGLGGAMLRHLKDLGDVETALI
ACDERGGIIRHTSPVGPIRSISGGLSRNSSGSSSTSWAPPAAKVLRRMSP
ELKALLAAATSSSWFRPKH*
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