prot_Ecto-sp13_S_contig14464.3436.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14464.3436.1
Unique Nameprot_Ecto-sp13_S_contig14464.3436.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length224
Homology
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A6H5KBP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP8_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 2.020e-148
Identity = 219/224 (97.77%), Postives = 221/224 (98.66%), Query Frame = 0
Query:    1 MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTAASCK 224
            MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKAT LVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEG VVDG VR+RGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTA+SCK
Sbjct:  104 MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGSVVDGSVRRRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTASSCK 327          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: D7FR69_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR69_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 2.780e-146
Identity = 219/224 (97.77%), Postives = 221/224 (98.66%), Query Frame = 0
Query:    1 MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTAASCK 224
            MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKAT LVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGP+VDGR RKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVS+ DTSRTMVFTNTAASCK
Sbjct:  304 MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPIVDGRGRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSDADTSRTMVFTNTAASCK 527          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A0G4ESI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESI9_VITBC)

HSP 1 Score: 144 bits (362), Expect = 1.130e-36
Identity = 87/238 (36.55%), Postives = 134/238 (56.30%), Query Frame = 0
Query:    1 MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTN---MKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVG--GQVFDKIQAVID----LLRDTVSE-----TDTSRTMVFTNTAASCK 224
            M+P  VV+VPN+ELCDQV+   + + + L      GVT    +G    +PF+P +PAP +L+CTP FL ++T    +K I LF     LV+DEAD+L++G Y+K L+ +L  FRR+ R   +  P             TQ+++ AATLP  G  SVD +++R FP A +++   MH+H P +QQ+F+ +G      D++  ++D    + RD  S       D  +T++F NT  S K
Sbjct:  149 MYPRAVVMVPNRELCDQVYRWAQELARPL------GVTTEMVWGGYESWPFTPAQPAPDVLICTPLFLGRFTKGGCVKDISLFQSVDTLVVDEADLLLDGGYKKDLEAVLTVFRRSGR---QGAP-------------TQHIMVAATLPNRGSGSVDAFLERRFPEALRVRNSLMHQHLPGMQQDFIPIGYDASTRDRLNMLVDKVTEMQRDRASRGGEEAVDVGKTIIFANTVNSAK 364          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A7S4D991_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D991_HETAK)

HSP 1 Score: 136 bits (343), Expect = 8.500e-36
Identity = 84/202 (41.58%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   37 VTAAAKYGSSYEYP-FSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGID-------KTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSE------TDTSRTMVFTNTAASCK 224
            V  AA  G+   +P F P +PAP++LVCTP+FL  +   + +P+F     LVLDEADML++G Y  QLD ++VA +R  R+         GR +    +       + Q VLAAATLPTYGLKSVD Y+++ F  A ++    MHRHHP + Q+F+EVGG + +KI+A++  L +  +E        T R MVF NT A+ +
Sbjct:    3 VAEAALGGAPPGWPYFRPGRPAPALLVCTPAFLAPFD--RHLPVFGHLRALVLDEADMLLDGGYLAQLDKVMVALKRVGRM----AETARGRYQDAYAEGALYTPARCQRVLAAATLPTYGLKSVDAYVRKHFKGAARVGTGLMHRHHPRLHQDFIEVGGSLGEKIEALLAYLDEEAAEGRGAGAPGTMRAMVFCNTVAAAE 198          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A836CM84_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM84_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.280e-35
Identity = 111/354 (31.36%), Postives = 149/354 (42.09%), Query Frame = 0
Query:    1 MFPDVVVLVPNKELCDQVHSVLKGILKALN------------ADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMV--------EEGPVVDGRVRK-----------------------------------------------------------------------------RGIDKT-------------------QYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQ---AVIDLLR-----------DTVSETDTSRTMVFTNTAASCK 224
            MFPD ++L PN+ELC+QV  V   +L+ L             A   T  +  A YG+S++YP+S  +PAP +LVCTP+FL  Y  +++IPLF +A  LV+DEADMLM+G Y + L DIL  FRRA RV          +  P  D   R                                                                               G+ +T                   QY+LAAATLP+YGLKSV+  ++RAFP A +I   HMHR HPA++Q +V V G          A+++ LR           D     +  R MVF NTAAS +
Sbjct:   69 MFPDAIILTPNRELCEQVRGVAAQLLEELGNPLRGEERAHEAAVLNTHTSIEALYGASFDYPYSEARPAPQLLVCTPAFLAGYGALRSIPLFVRARALVIDEADMLMDGDYARLLGDILTGFRRAARVDAALLPPCRRKPAPAYDADARSGGSSGGATHAEXXXXXXXXXXXXXXGDGEAGGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAAGGXXXXXXXSGVRRTWRGPRAAAGASGGEVPAGAQYILAAATLPSYGLKSVEALVRRAFPRATRITADHMHRQHPALRQEWVRVEGPPGPSAARDVALLEALRAANTAAGIGDDDAAGAAEPLRAMVFCNTAASAR 422          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A7S2XFB3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFB3_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 2.420e-33
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 0
Query:   44 GSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLME-GSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTA 220
            G   ++PF P  PAP ILVCTP  L ++  ++ + LF     LV+DEADML++ GSY   +++ILVAF+RA R M    P             TQ+VL+AAT+P  GLKSVD+ I++ FPNA  ++   MH+HHP+ QQ+FV+      DK+  V++ L       D  +T+VF NTA
Sbjct:    5 GVERDWPFRPRLPAPDILVCTPKMLRQF--VRDLDLFAGIETLVIDEADMLLDRGSYENDINEILVAFKRATRTMATNVP-------------TQFVLSAATIPNMGLKSVDRSIEKRFPNAEHVRAKLMHKHHPSTQQDFVKTTKDFDDKVSKVLESLEK--HSKDNPKTIVFANTA 165          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: W7TS57_9STRA (RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS57_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.330e-30
Identity = 81/200 (40.50%), Postives = 118/200 (59.00%), Query Frame = 0
Query:    3 PDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSP-NKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLL 201
            P  +VLVPN +L +QV  +   +L     +G   V   A  GS   +P+   ++ AP +LVCTP+ L  +   + + LF +  ILV+DEADML+EG Y + L+ ILVAF+RAD++              R    TQYVLAAATLP+YGLKSV++ +K+ FP+A ++    MH+HHP + Q FVE    +  KI  ++ +L
Sbjct:  265 PFAIVLVPNGQLSEQVLRMAGEVLG--QGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFD--REVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTA-----------RSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVL 449          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A7S3H293_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H293_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.110e-26
Identity = 71/188 (37.77%), Postives = 110/188 (58.51%), Query Frame = 0
Query:    2 FPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNKPAPSILVCTPSFLHKYTNMKAI---PLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEV 186
            +P  ++L P KELC Q+  + +  +K LN  G+     A    +   + ++P+   P+ LVCTP +L  +     I    LF     LVLDEADML++GSY K ++ IL A +   R ++ EG V   +V ++    TQ+VL+AAT+P++GLKSV  YI++ FP A+ +   +MH HHPAI Q ++ +
Sbjct:  136 YPCGIILAPTKELCWQIEDMAQATVKGLNDQGLRFRLEAVTEATG-RWKYAPDD-VPTFLVCTPKYLANFIQGPIIHEEALFESIRYLVLDEADMLLDGSYVKDVEKILDALKVVRRGLIREGLV---KVHEQ---VTQFVLSAATIPSFGLKSVKAYIQKRFPRAKIVWTENMHAHHPAIAQEYIMI 315          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A7S2R527_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R527_9STRA)

HSP 1 Score: 106 bits (265), Expect = 5.530e-24
Identity = 68/173 (39.31%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   62 VCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEV-------------GGQVFD-KIQAVIDLLRDTVSETDTSRTMVFTNTA 220
            VCTP+F+ + +  K + LF     +VLDEADML++G Y  Q+D+ILVA +R  R+  +  PVVD          TQ +L+AAT+PTYGLKSVD+ + + FPNA +++   +HR  P ++ ++VEV             G + F  +   + +LLR         RTMVF NTA
Sbjct:    1 VCTPAFMARQS--KNLHLFDFLEAIVLDEADMLLDGGYLNQVDEILVARKRILRMRQQHEPVVDRH--------TQVILSAATIPTYGLKSVDKLVAKRFPNAARVENDLLHRTQPQLEHHWVEVESMGDEREGGATVGSRAFAARCLQLEELLRPATPSDPIPRTMVFANTA 163          
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Match: A0A2C6LGE9_9APIC (Dead deah box helicase domain-containing protein (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6LGE9_9APIC)

HSP 1 Score: 101 bits (252), Expect = 3.470e-21
Identity = 74/225 (32.89%), Postives = 118/225 (52.44%), Query Frame = 0
Query:    3 PDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFSPNK--PAPSILVCTPSFLHKY---TNMKAIPLFCKATILVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEV--GGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTA 220
            P  V++VP +EL  QV + ++ + +       T +TA    G+   +PF       +P ++VCTPS L  +   T  K++  F +  ++VLDEADML++G YR+ +D I  AFR+AD+ +  E        ++R   +TQY+ AAAT+P  G KSV + I    P A       +H+H   + Q F+EV  G    D++  ++  LR+        + M+F NTA
Sbjct:  298 PYAVIIVPTRELALQVVAWVRRLCRK------TTITAQLMLGTYTRWPFGTLALPTSPDLVVCTPSVLAPFARGTKTKSLGPFREIQVVVLDEADMLLDGGYRESMDAIFTAFRKADQQLARE--------KRR---RTQYIFAAATIPDRGPKSVRKTITSLCPKATFFYTRSLHQHKEQLAQEFIEVPPGASEEDRMALLLGKLRELSGN---EKVMIFCNTA 502          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14464.3436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBP8_9PHAE2.020e-14897.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR69_ECTSI2.780e-14697.77DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A0G4ESI9_VITBC1.130e-3636.55Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S4D991_HETAK8.500e-3641.58Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CM84_9STRA1.280e-3531.36P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2XFB3_9EUKA2.420e-3342.70Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
W7TS57_9STRA1.330e-3040.50RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae... [more]
A0A7S3H293_9STRA1.110e-2637.77Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2R527_9STRA5.530e-2439.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2C6LGE9_9APIC3.470e-2132.89Dead deah box helicase domain-containing protein (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..168
e-value: 7.1E-19
score: 70.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 4..220
NoneNo IPR availablePANTHERPTHR24031:SF629ATP-DEPENDENT RNA HELICASE MRH4, MITOCHONDRIALcoord: 4..220
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 3..146
e-value: 4.0E-11
score: 43.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..163
score: 11.905
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14464contigEcto-sp13_S_contig14464:322..4392 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14464.3436.1mRNA_Ecto-sp13_S_contig14464.3436.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14464 322..4410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14464.3436.1 ID=prot_Ecto-sp13_S_contig14464.3436.1|Name=mRNA_Ecto-sp13_S_contig14464.3436.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
MFPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYP
FSPNKPAPSILVCTPSFLHKYTNMKAIPLFCKATILVLDEADMLMEGSYR
KQLDDILVAFRRADRVMVEEGPVVDGRVRKRGIDKTQYVLAAATLPTYGL
KSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDL
LRDTVSETDTSRTMVFTNTAASCK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase