prot_Ecto-sp13_S_contig14447.3420.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14447.3420.1
Unique Nameprot_Ecto-sp13_S_contig14447.3420.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14447.3420.1 vs. uniprot
Match: D7FMD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD8_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 9.450e-45
Identity = 73/81 (90.12%), Postives = 75/81 (92.59%), Query Frame = 0 
Query:    1 RRRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVWLRTLFDVHYDVWFRVQERTQKAGGTGWFEDVASP 81
            R+RAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAV LRTLFD   DVWFRVQERTQKAGGTGWF+DV  P
Sbjct:   29 RQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQKAGGTGWFQDVIFP 109
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BLAST of mRNA_Ecto-sp13_S_contig14447.3420.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.410e-20
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0 
Query:    1 RRRAEVAWEDLKQRLPDEVLENMCAILGR-DDAEAGEAAGLRAMAAVWLRTLFDVHYDVWFRVQERTQ 67
            RRRAE AWED+K RLPD+VLE +CA+LG+ D  E GE  GLRAMAAV LRTLFD+  DVWFRVQ++TQ
Sbjct:   25 RRRAEEAWEDMKMRLPDQVLEQVCAVLGQADGGEGGE--GLRAMAAVLLRTLFDIRSDVWFRVQQQTQ 90
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BLAST of mRNA_Ecto-sp13_S_contig14447.3420.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 3.420e-10
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:   18 EVLENMCAILGR-DDAEAGEAAGLRAMAAVWLRTLFDVHYDVWFRVQERTQ 67
            +VLE +CA+LG+ D  E GE  GLRAMAAV LRTLFD+  DVWFRVQ+ TQ
Sbjct:   47 QVLEQVCAVLGQADGGEVGE--GLRAMAAVLLRTLFDIRSDVWFRVQQETQ 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14447.3420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMD8_ECTSI9.450e-4590.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FNE2_ECTSI3.410e-2070.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCW6_9PHAE3.420e-1066.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14447contigEcto-sp13_S_contig14447:2..754 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14447.3420.1mRNA_Ecto-sp13_S_contig14447.3420.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14447 2..754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14447.3420.1 ID=prot_Ecto-sp13_S_contig14447.3420.1|Name=mRNA_Ecto-sp13_S_contig14447.3420.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
RRRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVWLRT
LFDVHYDVWFRVQERTQKAGGTGWFEDVASP
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