prot_Ecto-sp13_S_contig1433.3352.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1433.3352.1
Unique Nameprot_Ecto-sp13_S_contig1433.3352.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1433.3352.1 vs. uniprot
Match: D7G176_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G176_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 2.950e-22
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:   80 AKFVGKAEQNDQCTLDRTIFDQAQRQIYNLIETDLFPRFIQYVSQCQVNS 129
            AKFVGKAEQN+QCTLDRTIFDQAQRQIYNL ETD+FPRFIQYV QCQ  +
Sbjct:   11 AKFVGKAEQNNQCTLDRTIFDQAQRQIYNLTETDIFPRFIQYVRQCQART 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1433.3352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G176_ECTSI2.950e-2286.00RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1850coord: 39..127
e-value: 8.1E-7
score: 30.6
IPR016137RGS domainPROSITEPS50132RGScoord: 96..120
score: 9.336
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 87..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1433contigEcto-sp13_S_contig1433:11391..13674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1433.3352.1mRNA_Ecto-sp13_S_contig1433.3352.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1433 10688..13988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1433.3352.1 ID=prot_Ecto-sp13_S_contig1433.3352.1|Name=mRNA_Ecto-sp13_S_contig1433.3352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MVHGAVLRPPAFEGAYYRLVINLTRACASRRLGSVVGSQQTALSTAKNTG
CSLCYWRGPAMLLVNAGPPRRQCSDVMAGAKFVGKAEQNDQCTLDRTIFD
QAQRQIYNLIETDLFPRFIQYVSQCQVNSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf