prot_Ecto-sp13_S_contig14157.3233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14157.3233.1
Unique Nameprot_Ecto-sp13_S_contig14157.3233.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: D8LNH2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNH2_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.890e-74
Identity = 127/139 (91.37%), Postives = 131/139 (94.24%), Query Frame = 0
Query:    1 VRIINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPSTTETSGXXXRGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALVVLFGGWKVAAVIVFAYVIINQKPRGR 139
            VRIINGEIVSDDDPRVAGPQRR XXXXXXXXXQGRAGYG VASLLDPPST E +G   RGPAA GRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPF+YLMIAALVVLFGGWKVAA+IVFAYV+INQKPRGR
Sbjct:    2 VRIINGEIVSDDDPRVAGPQRRGXXXXXXXXXQGRAGYGHVASLLDPPSTAEATGGGARGPAAGGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFVYLMIAALVVLFGGWKVAALIVFAYVLINQKPRGR 140          
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: A0A836CLX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.270e-14
Identity = 48/131 (36.64%), Postives = 65/131 (49.62%), Query Frame = 0
Query:    1 VRIINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPSTTETSGXXXRGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALVVLFGGWKVAAVIVFAYVI 131
            VRIINGEIV D+DPR+    + A           R G+G       P             P+A     GA+  PL +LA+M+GV+G+T+TIP   GV  + V  I+L++ A V L  GWK  A     YV+
Sbjct:    1 VRIINGEIVQDNDPRLRQRTQSAATTA-------RGGFGAGDGAARPT------------PSAAAMAGGAAESPLQRLADMLGVKGKTITIPAVFGVPSRDVEVIHLLLVAAVSLIFGWKALAFTAVLYVV 112          
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: A0A7S0IP37_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IP37_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 8.540e-12
Identity = 50/139 (35.97%), Postives = 69/139 (49.64%), Query Frame = 0
Query:    3 IINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPS---TTETSGXXXRGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALVVLFGGWKVAAVIVFAYVIINQKPRG 138
            II+GEIV D+DPR    + +              G GR A    P     T +T+     G AA     GAS  PLD LA MIGVQG+++T+P    +  ++VP I L++  +V LF GW+V AV    +V+      G
Sbjct:   43 IIDGEIVPDNDPRAIAKRNKV-------------GTGRAAGAPAPTPQRHTAQTAHTTAPGGAADSAMGGAS--PLDALANMIGVQGQSLTVPAVWRLPAREVPLIVLILLGVVTLFFGWQVLAVAALLHVVSGLSDAG 166          
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: A0A484E731_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E731_BRELC)

HSP 1 Score: 65.5 bits (158), Expect = 5.700e-11
Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 0
Query:    1 VRIINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPSTTETSGXXXRGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALVVLFGGWKVAAVIVFAYVIINQKP 136
            VRIINGEIV DDDPRV    +           Q +  + R   +    S+   SG   R P A G        PL++LA  +G+ G T+ +P  LG   + +  IY+++  L+    GW+    + FAY +I Q+P
Sbjct:    2 VRIINGEIVPDDDPRVRAQLQ---------PQQNQLPHRRFGYVHGSKSSVAPSGSGTRAPPAPG------LSPLEELARQVGLDG-TLVVPAVLGFPARPILKIYVVMGVLLTAVFGWRALVFLCFAYFLIKQQP 121          
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: A0A7S2C2E5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2E5_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.250e-9
Identity = 50/149 (33.56%), Postives = 68/149 (45.64%), Query Frame = 0
Query:    1 VRIINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPSTTETSGXXXRGPAAWGRGAGASTGPLDK----LAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALV-VLFGGWKVAAVIVFAYVIIN-----QKPRGR 139
            V+IINGEIV DDDPR    ++RA              +G         S     G     P+       A   PL K    LA+ + ++GR VTIP   GV + +V  IYL+I  +V VL   W++ AV V  Y +I      Q+ +GR
Sbjct:    7 VKIINGEIVQDDDPRAQRLRQRASAAQRPIPTS--VNFGGSGGRAHSSSRGGNGGFGGTPPSTPVASDPAQQNPLMKIVQQLAKFLNIEGRLVTIPAVFGVPQSEVELIYLIIIGVVSVLSKSWRIPAVAVVVYFVIKHNETQQQQQGR 153          
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Match: A0A0M0JAQ1_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAQ1_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-8
Identity = 42/131 (32.06%), Postives = 63/131 (48.09%), Query Frame = 0
Query:    1 VRIINGEIVSDDDPRVAGPQRRAXXXXXXXXXQGRAGYGRVASLLDPPSTTETSGXXXRGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQQVPFIYLMIAALVVLFGGWKVAAVIVFAYVI 131
            V IINGEIV D+DPR    +                G   + +L          G    G    G   GA  GPLD++AE +G++G++V IP    +  ++V  I+++I AL+ LF GW + AV    +V+
Sbjct:    2 VVIINGEIVPDNDPRAIARRNPKPAASTAP------GQSNIRNL---------HGGGGAGMPRMGGAGGAGPGPLDQVAEALGIRGQSVEIPAIWRLPARRVQLIHIVILALLALFFGWHILAVAAVLHVV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14157.3233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LNH2_ECTSI1.890e-7491.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLX7_9STRA3.270e-1436.64Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S0IP37_9EUKA8.540e-1235.97Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A484E731_BRELC5.700e-1133.09Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2C2E5_9STRA2.250e-933.56Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A0M0JAQ1_9EUKA1.410e-832.06Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..132
NoneNo IPR availableTMHMMTMhelixcoord: 110..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14157contigEcto-sp13_S_contig14157:780..2690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14157.3233.1mRNA_Ecto-sp13_S_contig14157.3233.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14157 780..2690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14157.3233.1 ID=prot_Ecto-sp13_S_contig14157.3233.1|Name=mRNA_Ecto-sp13_S_contig14157.3233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
VRIINGEIVSDDDPRVAGPQRRAGGGGGGGGGQGRAGYGRVASLLDPPST
TETSGGGARGPAAWGRGAGASTGPLDKLAEMIGVQGRTVTIPGALGVQEQ
QVPFIYLMIAALVVLFGGWKVAAVIVFAYVIINQKPRGR*
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