prot_Ecto-sp13_S_contig1407.3178.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1407.3178.1
Unique Nameprot_Ecto-sp13_S_contig1407.3178.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1407.3178.1 vs. uniprot
Match: A0A6H5JSX4_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX4_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 2.360e-87
Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 0 
Query:    1 MVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPDHDPKTTSKNFDALVEALKREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLSCSKLIVCRQAALSRRHKRTEEERR 135
            MVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFP HDPKTTSKNFDALV+AL+REGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHL CSKLIVCRQAALSRRHKRTEEERR
Sbjct:   37 MVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVIDTPGFPGHDPKTTSKNFDALVKALRREGSLSTLIFLVQQEEVSPTEFRDYAVLLRQLNHLPCSKLIVCRQAALSRRHKRTEEERR 171
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1407.3178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSX4_9PHAE2.360e-8797.04G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 1..95
e-value: 4.4E-9
score: 36.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..134
e-value: 5.4E-11
score: 44.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1407contigEcto-sp13_S_contig1407:6927..7334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1407.3178.1mRNA_Ecto-sp13_S_contig1407.3178.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1407 6927..7334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1407.3178.1 ID=prot_Ecto-sp13_S_contig1407.3178.1|Name=mRNA_Ecto-sp13_S_contig1407.3178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
MVIGMPRAGKSNLANKLLNHPTWDAFEEGDGTYGSTTETQRVEWADLVVI
DTPGFPDHDPKTTSKNFDALVEALKREGSLSTLIFLVQQEEVSPTEFRDY
AVLLRQLNHLSCSKLIVCRQAALSRRHKRTEEERR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase