prot_Ecto-sp13_S_contig14064.3171.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14064.3171.1
Unique Nameprot_Ecto-sp13_S_contig14064.3171.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length285
Homology
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 525 bits (1351), Expect = 4.840e-184
Identity = 280/285 (98.25%), Postives = 282/285 (98.95%), Query Frame = 0
Query:    1 MEFPRSAALALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            ME  RSAALALVGLLAATST XXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDP+SGNVST+ATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 1.910e-182
Identity = 276/285 (96.84%), Postives = 280/285 (98.25%), Query Frame = 0
Query:    1 MEFPRSAALALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            ME  RSAALALVGLLAATST XXXXXXXXXXXXXXXXXX DIAVSIRYA +TARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDP+SGNVST+ATGTWLLTEELYVEDGITL+VYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 5.390e-163
Identity = 236/289 (81.66%), Postives = 248/289 (85.81%), Query Frame = 0
Query:    1 MEFPRSAA----LALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            MEF RSA     LAL+GLLAAT  A                  SDIAVSIRYA +T RLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDPESGN S N TGTWLLTEELYVEDGITLKVYG+  GGDADELRLLST +T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNP +FD+VNVYGN+YDSDIHHM FGLYTYGHQQGDWRRNKMHDNSGYG
Sbjct:    1 MEFRRSATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYG 288          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 3.320e-161
Identity = 233/290 (80.34%), Postives = 251/290 (86.55%), Query Frame = 0
Query:    1 MEFPRSAA-----LALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            MEF R +A     LAL+GLLA+T+ A                  SDI VSIRYAGTT RLYLESAD G TRGGC TLGQIWESRAGK PLYAVDP+SG+VS   TGTWLLTEELYVEDGITLKVYG++ GGDADELRLLST+ET+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYG
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESAD-GETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYG 289          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: D8LHA2_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 5.640e-142
Identity = 207/272 (76.10%), Postives = 230/272 (84.56%), Query Frame = 0
Query:    1 MEFPRSAA-----LALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYG 267
            MEF R +A     LAL+GLLA+T+ A                  SDI VSIRYAG T RLYLESAD G TRGGC TLGQ+WESRAGKGPLYAVDP+SG+VS   TGTWLLTEELYVEDGITLKVYG++ GGDADELRLLST++T+INLRA+GGSLDFV TKVFSWDTSTNSPD  ETDGRSYISA+SEI+TDEDE+CEG+AKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYT G
Sbjct:    1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESAD-GETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 7.820e-136
Identity = 190/246 (77.24%), Postives = 220/246 (89.43%), Query Frame = 0
Query:   40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            S IAVS+RY   +ARLY+ESA NG TRGGCVTL QIWE +    PLYAVDP+SG+VS +ATGTWLLTEE+YVEDGITL+V+G  AGGDADELRLLST++TFI+LRA+GGSLDF+STKVF+WDTS N+PD+DE+DGRSYISA+SE+ITD+ +TC G AKN MGEARMDIE+SE+ YLGY  +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:   12 SSIAVSVRYNAESARLYIESA-NGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 256          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 9.000e-136
Identity = 199/276 (72.10%), Postives = 226/276 (81.88%), Query Frame = 0
Query:   10 ALVGLLAATSTAXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            ALVG+LA    A                  S IAVSIRY+    RLYLESAD+  TRGGCVTL QIWE + G+ PLYAVD +SG++S +ATGTWLLTEEL+VEDGITLKV+G+ AGGDADELRLLST++TFINLRAHGGSLDF+STKVF+WDTS N PD DE DGRSY+SA+SE+ITD+ +TC G AKN MGEARMDIE SE+GYLGY  SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYG
Sbjct:    9 ALVGILALKLAAGKDTKSPNEPIPKPECDES-IAVSIRYSSVYERLYLESADS-KTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYG 282          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 1.010e-122
Identity = 180/246 (73.17%), Postives = 207/246 (84.15%), Query Frame = 0
Query:   40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            S   VSIRY+ ++ RLYLESAD G TRGGCVTL +IW+   G  PLYAV P SG+VS++ATGTWLLTE+LYVEDGITL+V+G+ AGG+A+ELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D +  RSYISA+SEIITD  E C+G AK TMGEARMDIE SE+ YLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YG
Sbjct:   41 SSTKVSIRYSASSKRLYLESAD-GKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYG 285          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 3.110e-121
Identity = 184/256 (71.88%), Postives = 207/256 (80.86%), Query Frame = 0
Query:   43 AVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            AVSIRY+ TT RLYLE+   G  RGGCVT+ QIWE+R G      K PLYAVDP SG  S   TGTWLL E+LYVEDGITLKV+G+ +GG ADELRL ST       N T+INLRAHGGSLDF  TKVF WDT+ NS D DETDGRSYISA+SEI+ D  +TCEGNAKNTMGEARMDI +SE+GY+G+ DSESYGLTWKVRGFC+DKSNPEVFD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGYG
Sbjct:  120 AVSIRYSATTGRLYLEAGVEGE-RGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYG 374          
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 359 bits (921), Expect = 5.540e-119
Identity = 177/246 (71.95%), Postives = 199/246 (80.89%), Query Frame = 0
Query:   40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG 285
            S   VSIRY+ T+ RLYLESAD G TRGGCVTL  IW    G  PLYAV P SG+VS++ TGTWLLTE LYVEDGITL+V+G  AGG ADELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D++ GRSYISA+SE+ITD  + C+G AK  MGEARMDIE SE+ YLGY+ SESYGLTWKVRG C D SN EVFD VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N+ YG
Sbjct:   38 SSTKVSIRYSKTSKRLYLESAD-GNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYG 282          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14064.3171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G339_ECTSI4.840e-18498.25Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI1.910e-18296.84Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE5.390e-16381.66MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI3.320e-16180.34Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LHA2_ECTSI5.640e-14276.10Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
Q7XAJ8_9PHAE7.820e-13677.24Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ7_9PHAE9.000e-13672.10Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAK2_9PHAE1.010e-12273.17Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D8LD45_ECTSI3.110e-12171.88Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA5.540e-11971.95Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 46..285
e-value: 2.6E-53
score: 183.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.842

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14064contigEcto-sp13_S_contig14064:2286..4240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14064.3171.1mRNA_Ecto-sp13_S_contig14064.3171.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14064 2189..4240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14064.3171.1 ID=prot_Ecto-sp13_S_contig14064.3171.1|Name=mRNA_Ecto-sp13_S_contig14064.3171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp
MEFPRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDIAVSIRYAG
TTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPESGNVSTNAT
GTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSL
DFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTM
GEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGN
VYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold