prot_Ecto-sp13_S_contig1404.3151.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1404.3151.1
Unique Nameprot_Ecto-sp13_S_contig1404.3151.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length270
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1404.3151.1 vs. uniprot
Match: A0A6H5KYH1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH1_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 1.900e-116
Identity = 217/279 (77.78%), Postives = 219/279 (78.49%), Query Frame = 0 
Query:    5 EGKASVAAVTDEGDTVLHAAAGSGTPSCGGGGPAGRMVKLILKSGADVDTCNRLGSTALHLAAAAADLDSVALLLSAGGNPSVVNSCGLCPGAGFLRPPNGGAATATATTDTASSERVKDVRWIIREHRERFGHVRRLADASAKRVAVEAVADGATASVHRFVDFALKV--------------QRWDLDARNHRTRLRRLDKFRSDILSDSPKQPTASDGNDGGNSLLLDLSPERESGAARAVKGRTKAAAEATKGGKLALRDLEDWRGRISAERAAVE 269
            EGKASVAA TDEGDTVLHAAAGSGTP CGGG                                AAADLDSVALLLSAG N SVVNSCGLCPGAGFLRPPNGGAA ATATT T SSERVKDVRW+IR HRER GHVRRLADASAKRVAVEAVADGATASVHRFVDFALKV              QRWDLDARNHRTRLRRLDKFRSDILSD PKQPTA DGN+GGNSLLLDLSPERES AAR VKGRTKAAAEATK GKLALRDLEDWRGRISAERAAVE
Sbjct:  327 EGKASVAAATDEGDTVLHAAAGSGTPPCGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADLDSVALLLSAGANASVVNSCGLCPGAGFLRPPNGGAAIATATTYTGSSERVKDVRWMIRGHRERLGHVRRLADASAKRVAVEAVADGATASVHRFVDFALKVPMLVVGTQRETWTVQRWDLDARNHRTRLRRLDKFRSDILSDPPKQPTAVDGNNGGNSLLLDLSPERESRAARVVKGRTKAAAEATKEGKLALRDLEDWRGRISAERAAVE 605
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1404.3151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYH1_9PHAE1.900e-11677.78Protein kinase domain-containing protein n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 16..54
e-value: 43.0
score: 13.0
coord: 58..87
e-value: 0.0084
score: 25.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 58..90
score: 11.594
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 16..57
score: 10.927
NoneNo IPR availablePFAMPF13637Ank_4coord: 40..79
e-value: 7.6E-6
score: 26.4
NoneNo IPR availablePANTHERPTHR24118FAMILY NOT NAMEDcoord: 8..93
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..132
e-value: 3.6E-18
score: 67.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..95
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..90
score: 20.951

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1404contigEcto-sp13_S_contig1404:12554..13823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1404.3151.1mRNA_Ecto-sp13_S_contig1404.3151.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1404 12554..13825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1404.3151.1 ID=prot_Ecto-sp13_S_contig1404.3151.1|Name=mRNA_Ecto-sp13_S_contig1404.3151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp
ALIREGKASVAAVTDEGDTVLHAAAGSGTPSCGGGGPAGRMVKLILKSGA
DVDTCNRLGSTALHLAAAAADLDSVALLLSAGGNPSVVNSCGLCPGAGFL
RPPNGGAATATATTDTASSERVKDVRWIIREHRERFGHVRRLADASAKRV
AVEAVADGATASVHRFVDFALKVQRWDLDARNHRTRLRRLDKFRSDILSD
SPKQPTASDGNDGGNSLLLDLSPERESGAARAVKGRTKAAAEATKGGKLA
LRDLEDWRGRISAERAAVER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom