prot_Ecto-sp13_S_contig1392.3063.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1392.3063.1
Unique Name	prot_Ecto-sp13_S_contig1392.3063.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	291

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1392.3063.1 vs. uniprot
Match: D7FP35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP35_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 1.460e-147
Identity = 252/294 (85.71%), Postives = 263/294 (89.46%), Query Frame = 0

Query:    1 ASGKQVWADLRTEVTDVVQAQTPNLALAGSFGTKDPETATSPATTPAETPGRRFPILFVGGVFSVLAMVGLVRLFAFTARRMALTVAATWHTYLQRLVSGIVASGLRRPFARLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARGAMCRKARRLDETVEWLTETVLNLEAIVGETXXXXXXXXXXXXXXXXXXXXXXGGAAQLNHVTTLVNGLLTAAAQ--NHFTYEQTQTTPATGGRLRLDPEKPLHLT-VRRVLIMSEVGRHLHDDGLKHERRGGENCKQSKNGQGG 291
            ASGKQ WAD+RTE+T+VVQ QTPNLALA +FGTKDPETATSPATTPAETPGRRFP+L VGGVFSVLAMVGLVRL  FTARRMALTVAAT H YLQR++SGIVASGLRRPFARLQAELTSA+PRLWGAVS +NLRLGRVEELHRCAMNARGAMCR+  RL ETVEWLTETVLNLEA V ET XXXXXXXXXXXXXXXXXX   GGAAQLNHVTTLVNGLLTAAAQ   HFTYEQTQTTPATGGRLRL+PEKP H T VRRVL MSEV R LHD GLK ERRG EN KQSKNGQGG
Sbjct:    7 ASGKQAWADVRTEITEVVQVQTPNLALASTFGTKDPETATSPATTPAETPGRRFPLLLVGGVFSVLAMVGLVRLLTFTARRMALTVAATAHAYLQRMISGIVASGLRRPFARLQAELTSAIPRLWGAVSTINLRLGRVEELHRCAMNARGAMCRERGRLAETVEWLTETVLNLEATVSETRXXXXXXXXXXXXXXXXXXIIGGGAAQLNHVTTLVNGLLTAAAQVNRHFTYEQTQTTPATGGRLRLNPEKPFHPTAVRRVLFMSEVCRQLHD-GLKRERRGRENYKQSKNGQGG 299

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BLAST of mRNA_Ecto-sp13_S_contig1392.3063.1 vs. uniprot
Match: A0A6H5J6H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H6_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 1.610e-97
Identity = 179/280 (63.93%), Postives = 183/280 (65.36%), Query Frame = 0

Query:   68 MVGLVRLFAFTARRMALTVAATWHTYLQRLVSGIVASGLRRPFARLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARGAMCRKARRLDETVEWLTETVLNLEAIVGETXXXXXXXXXXXXXXXXXXXXXXGGAAQLNHVTTLVNG------------------------------------------------------LLTAAA---QNHFTYEQTQTTPATGGRLRLDPEKPLHLTVRRVLIMSEVGRHLHDDGLKHERRGGENCKQSKNGQG 290
            MVGLVRLFAFTARRMAL VAATWH YLQR VSGIVAS LRRPFARLQAELTSALPRLWGAVSNLN RLGRV+ELHRCAMNARGAMCRKAR+LDETVEWLTETVLNLEAI+ ET                      GGAAQLNHVTTL  G                                                      + T      QNHFTYEQTQTTPA GGRLRLDPEKP H TVRRVLIMSEV RHLHDDGLKHERRG ENCK SKNGQG
Sbjct:    1 MVGLVRLFAFTARRMALIVAATWHAYLQRKVSGIVASALRRPFARLQAELTSALPRLWGAVSNLNPRLGRVKELHRCAMNARGAMCRKARQLDETVEWLTETVLNLEAIISETRRLAIIS---------------GGAAQLNHVTTLDGGRARPRCGQALGRVRGKGCGASRRMRNKNRGSVRKNGGRDSGRLRCQATGQCRLEIATTGEPFLQNHFTYEQTQTTPAAGGRLRLDPEKPCHPTVRRVLIMSEVCRHLHDDGLKHERRGRENCKLSKNGQG 265

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1392.3063.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1392.3063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FP35_ECTSI	1.460e-147	85.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5J6H6_9PHAE	1.610e-97	63.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 77..291
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..53
None	No IPR available	TMHMM	TMhelix		coord: 55..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1392	contig	Ecto-sp13_S_contig1392:12979..16252 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1392.3063.1	mRNA_Ecto-sp13_S_contig1392.3063.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1392 12979..16252 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1392.3063.1 ID=prot_Ecto-sp13_S_contig1392.3063.1|Name=mRNA_Ecto-sp13_S_contig1392.3063.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
ASGKQVWADLRTEVTDVVQAQTPNLALAGSFGTKDPETATSPATTPAETP
GRRFPILFVGGVFSVLAMVGLVRLFAFTARRMALTVAATWHTYLQRLVSG
IVASGLRRPFARLQAELTSALPRLWGAVSNLNLRLGRVEELHRCAMNARG
AMCRKARRLDETVEWLTETVLNLEAIVGETRRLVATVEWLATSIVNLKAI
IGGGAAQLNHVTTLVNGLLTAAAQNHFTYEQTQTTPATGGRLRLDPEKPL
HLTVRRVLIMSEVGRHLHDDGLKHERRGGENCKQSKNGQGG