prot_Ecto-sp13_S_contig1374.2939.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1374.2939.1
Unique Nameprot_Ecto-sp13_S_contig1374.2939.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length634
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1374.2939.1 vs. uniprot
Match: D7FWD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD3_ECTSI)

HSP 1 Score: 944 bits (2441), Expect = 0.000e+0
Identity = 555/642 (86.45%), Postives = 567/642 (88.32%), Query Frame = 0 
Query:    1 MNKSAIVNCRWTIRPVRSDGQSLVGKDGNEVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNRSAGSXXXXXXX-ASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQDFLTSGAAFPREIRVRTTHFVSESASRAISSASHSPQRRGGADGCXXXXXXXXXXXVVGYSRGGVSLGGSWDGFGDGGGSSAWLNAGSWGTDVLQAMTDFARAGAESGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGEDEDGG-DEGHGWSLVSPMCSRCRYLTAHPLTPPPPAGTIGTCSSRSLSSSASTATAT--DEADGTLGRYCLCTVNRDIQREVLQGDASGGHARAATTELGAPL-VGTEAGHEASISSPTAEGVAPSASSGASRLSTPAGGAASGLNPSEMSGELALEGAGRPTGGASERNTSLGGG----GGLSRMPSSNTLALAAGGFAAXXXXXAIGGLKRARDRRADRRKKKDPFEALEERLLDGFSLESITKRLQQQDETLQKGVRYVERMESRRHEPGRRSNEEHQRYLMVQKKRFEAVVSDSIAESIAGGSLRAGDEGGSEDARIVDNAPGADVVAVASKEVASDENVD 633
            MNKSAIVNCRWT+RPVRSDGQSL+GKDG EVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNRSAG XXXXXXX ASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQD LTSGAAFPREIRVRTTHFVSESASRAISSASHSP R GGA        XXXXXXVVGYSR GVSLGGSWDGFGDGGG SAWL+AGSWGTDVLQAMTDFARAGAE GVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGE EDGG DEGHGWSLVSPMCSRCRYLTAHPLTPPPPAGTIGTCSSRSLS           DEA+ TLGRYCLCTVNR+IQ EVLQGDASGGHARAAT E GA L VGTEAGHE S+SSPTAEG                      +N SEM GELALEGAGRP GGASERNTSLGGG    GGLSRMPSSNTLALAAGGFAAXXXXX IGGLKRARDRRADRRKKKDPFEALEERLLDGFSLESITKRLQQQDETLQKGVR+VERMESRRHEPGRRSNEEHQRYLMVQKKRFEAVVSDSIAESI G SL AGDE GSEDA +VD+A GA+VVA ASK+VASDEN D
Sbjct:  508 MNKSAIVNCRWTVRPVRSDGQSLLGKDGKEVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNRSAGXXXXXXXXXASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQDRLTSGAAFPREIRVRTTHFVSESASRAISSASHSPHRGGGAX-------XXXXXXVVGYSRSGVSLGGSWDGFGDGGGGSAWLSAGSWGTDVLQAMTDFARAGAERGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGEGEDGGGDEGHGWSLVSPMCSRCRYLTAHPLTPPPPAGTIGTCSSRSLSXXXXXXXXXXXDEAEVTLGRYCLCTVNREIQTEVLQGDASGGHARAATAEPGAALSVGTEAGHEPSVSSPTAEGGXXXXXXXXXXXXXXXXXXXXXMNASEMGGELALEGAGRPVGGASERNTSLGGGXXCGGGLSRMPSSNTLALAAGGFAAXXXXXXIGGLKRARDRRADRRKKKDPFEALEERLLDGFSLESITKRLQQQDETLQKGVRHVERMESRRHEPGRRSNEEHQRYLMVQKKRFEAVVSDSIAESITGSSLSAGDERGSEDAPMVDDARGANVVA-ASKKVASDENAD 1141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1374.2939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWD3_ECTSI0.000e+086.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 480..499
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..479
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 500..633
NoneNo IPR availableTMHMMTMhelixcoord: 480..499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1374contigEcto-sp13_S_contig1374:393..6089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1374.2939.1mRNA_Ecto-sp13_S_contig1374.2939.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1374 387..6438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1374.2939.1 ID=prot_Ecto-sp13_S_contig1374.2939.1|Name=mRNA_Ecto-sp13_S_contig1374.2939.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=634bp
MNKSAIVNCRWTIRPVRSDGQSLVGKDGNEVSNLDYVYLEQDFFYMTRVS
ENASVVLKALSHNNRSAGSNGGGGSSASGKRGTAQKHHPVGRRGVFKLQV
ADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQDFLTSG
AAFPREIRVRTTHFVSESASRAISSASHSPQRRGGADGCAGGAGGGGEGG
VVGYSRGGVSLGGSWDGFGDGGGSSAWLNAGSWGTDVLQAMTDFARAGAE
SGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDSNGEDEDG
GDEGHGWSLVSPMCSRCRYLTAHPLTPPPPAGTIGTCSSRSLSSSASTAT
ATDEADGTLGRYCLCTVNRDIQREVLQGDASGGHARAATTELGAPLVGTE
AGHEASISSPTAEGVAPSASSGASRLSTPAGGAASGLNPSEMSGELALEG
AGRPTGGASERNTSLGGGGGLSRMPSSNTLALAAGGFAAGGAGGAIGGLK
RARDRRADRRKKKDPFEALEERLLDGFSLESITKRLQQQDETLQKGVRYV
ERMESRRHEPGRRSNEEHQRYLMVQKKRFEAVVSDSIAESIAGGSLRAGD
EGGSEDARIVDNAPGADVVAVASKEVASDENVD*
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