prot_Ecto-sp13_S_contig13726.2928.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13726.2928.1
Unique Nameprot_Ecto-sp13_S_contig13726.2928.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.660e-100
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKTGCC 154
            DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRA+GNVNLNAQASKKKTGCC
Sbjct:   56 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQASKKKTGCC 205          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A6H5KYQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYQ5_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 6.650e-100
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKTGCC 154
            DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF+SIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKK GCC
Sbjct:   25 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFSSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKAGCC 174          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 9.250e-82
Identity = 127/151 (84.11%), Postives = 137/151 (90.73%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASK-KKTGCC 154
            D+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD+D +REVS EEGAQLAAEYGIQFFETSAKNDINVEKGFIT+AREVK+RLMADG + G+R  GNV L+A A   KK+ CC
Sbjct:   56 DTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.740e-70
Identity = 113/152 (74.34%), Postives = 125/152 (82.24%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGN--VNLNAQASKKKTGCC 154
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAKND+NVE  F+TIAREVKDRL+ D    G+ A G   VNL      KK+GCC
Sbjct:   47 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLD---VGTMARGGERVNLGNAKPAKKSGCC 195          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 218 bits (555), Expect = 8.460e-70
Identity = 111/150 (74.00%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKTGCC 154
            D+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAKN+INVE GFI IAREVK+RLM +G   G     NVNL+A+ +  K GCC
Sbjct:   56 DNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEG---GPHKKENVNLSAKPAAPKKGCC 202          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A7S4M6F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M6F2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 9.110e-68
Identity = 108/151 (71.52%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN-PGSRASGNVNLNAQASKKKTGCC 154
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV+QIQQHADV VNKIL+GNKCDM +++ VS EEGA+LA E+GI+F+E SAKNDINVE+ FI IAR+VKDRL+ADG   P +    ++N   Q S++  GCC
Sbjct:   56 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVSQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGAKLAKEFGIEFWECSAKNDINVEQAFIGIARDVKDRLVADGGGGPAANKGLSLNKPGQGSQRNRGCC 206          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 213 bits (541), Expect = 1.290e-67
Identity = 109/147 (74.15%), Postives = 122/147 (82.99%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKT 151
            D KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM ++R V+ EEG +LAAEYGIQFFETSAKNDI VE+ F+T+AREVK+RL+ D      +    VNL  Q S  K+
Sbjct:   56 DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLIND---VDRKTDARVNLQTQKSSSKS 199          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.670e-67
Identity = 111/150 (74.00%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKTGCC 154
            D+KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV+QIQQHADV VNKILIGNKCDM++ R VS +EG +LA EYGIQFFETSAKNDI V+ GF+ IAREVK+RL+ADGP   +  SG  N + Q +K K   C
Sbjct:   55 DNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPT--AVRSGIHNPSHQNNKSKGRAC 202          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.760e-67
Identity = 110/151 (72.85%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNL-NAQASKKKTGCC 154
            D +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAKNDINVEK F+TIAREVK+R++ DG   G RA+G   + +A+ S +   CC
Sbjct:   56 DGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKRSNEAKKCC 203          
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Match: A0A6U3X2X0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X2X0_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.130e-66
Identity = 105/150 (70.00%), Postives = 122/150 (81.33%), Query Frame = 0
Query:    5 DSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKKTGCC 154
            D KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNW++QIQQHADV VNKIL+GNKCDM  ++ VS EEG +LA E+GI F+E SAKNDINVE+ FI+IAR+VKDRL+ DG   G   +  VNL +     K GCC
Sbjct:   59 DGKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLHEKVVSTEEGQKLAKEFGIDFWECSAKNDINVEQSFISIARDVKDRLVTDGG--GGPTNSRVNLKSPQGSTKKGCC 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13726.2928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A4_ECTSI1.660e-10099.33Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI... [more]
A0A6H5KYQ5_9PHAE6.650e-10098.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCB2_9STRA9.250e-8284.11Rab8A, rab family GTPase n=2 Tax=Tribonema minus T... [more]
A0A7S2V1J6_9STRA4.740e-7074.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WPX9_GLOUD8.460e-7074.00Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
A0A7S4M6F2_9STRA9.110e-6871.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6T5Q365_HETAK1.290e-6774.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RB79_9STRA1.670e-6774.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D279_9STRA4.760e-6772.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6U3X2X0_9STRA2.130e-6670.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 64..77
score: 43.7
coord: 99..121
score: 43.27
coord: 2..24
score: 52.98
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..124
e-value: 5.6E-6
score: -41.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 5..124
e-value: 6.0E-15
score: 65.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..124
e-value: 3.8E-51
score: 185.9
NoneNo IPR availableGENE3D3.40.50.300coord: 3..154
e-value: 1.7E-49
score: 169.9
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 5..131
NoneNo IPR availablePANTHERPTHR24073:SF978coord: 5..131
NoneNo IPR availablePROSITEPS51419RABcoord: 1..154
score: 26.148
IPR001806Small GTPasePFAMPF00071Rascoord: 5..122
e-value: 8.3E-46
score: 155.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 5..115
e-value: 9.9E-19
score: 65.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13726contigEcto-sp13_S_contig13726:145..2245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13726.2928.1mRNA_Ecto-sp13_S_contig13726.2928.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13726 145..2245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13726.2928.1 ID=prot_Ecto-sp13_S_contig13726.2928.1|Name=mRNA_Ecto-sp13_S_contig13726.2928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
TPLRDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNS
IRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFF
ETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRASGNVNLNAQASKKK
TGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase