prot_Ecto-sp13_S_contig13714.2922.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13714.2922.1
Unique Nameprot_Ecto-sp13_S_contig13714.2922.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length227
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13714.2922.1 vs. uniprot
Match: D7G824_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G824_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 7.940e-63
Identity = 122/149 (81.88%), Postives = 131/149 (87.92%), Query Frame = 0 
Query:    2 PGGGGSQAGVGSPAAGGEGXXXAGGLGRTSPRSSSYGYFDGEEPSWEEYDRHVARQPGELENQPSAKGGGEKDT-PLEATPSSRGAHPQQWDVWAEYLAYEAATKRLLRELRYFLGSVDALAPTAPNMAFALESLGAEGTGTGSNGGVA 149
            PGGGGSQAGVG+PAA GEG   AGGLGRTSPRSSSYGYF+GEEPSWEEYDRHVA QPG++E+ PSAKGGGE+DT PLE TPSS    PQQWDVWAE LAYEAATKRLLRELR+ LG +DALAPTAPNMAFALESLGAEGTG GS+G  A
Sbjct: 2731 PGGGGSQAGVGNPAAAGEGGV-AGGLGRTSPRSSSYGYFEGEEPSWEEYDRHVAWQPGDVESGPSAKGGGEQDTSPLEPTPSSSATFPQQWDVWAEDLAYEAATKRLLRELRHLLGGLDALAPTAPNMAFALESLGAEGTGAGSSGDAA 2878
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BLAST of mRNA_Ecto-sp13_S_contig13714.2922.1 vs. uniprot
Match: A0A6H5K928_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K928_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.090e-62
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 0 
Query:   14 PAAGGEGXXXAGGLGRTSPRSSSYGYFDGEEPSWEEYDRHVARQPGELENQPSAKGGGEKDTPLEATPSSRGAHPQQWDVWAEYLAYEAATKRLLRELRYFLGSVDALAPTAPNMAFALESLGAEGTGTGSNGGVA 149
            PAAGG     AGGL RTSPRSSSYGYF+GEEPSWEEYDRHV RQPG++E++PSAKGGGE+DTPLEATPSS GAHPQQWDVWAE LAYEAATKRLLRELR+ LG +DALAPTAPNMA ALESLGAEGTG GSNGG A
Sbjct: 2779 PAAGGGEGGVAGGLARTSPRSSSYGYFEGEEPSWEEYDRHVGRQPGDVESEPSAKGGGEQDTPLEATPSSWGAHPQQWDVWAEDLAYEAATKRLLRELRHLLGGLDALAPTAPNMAVALESLGAEGTGAGSNGGAA 2914
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13714.2922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G824_ECTSI7.940e-6381.88PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K928_9PHAE1.090e-6283.82PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13714contigEcto-sp13_S_contig13714:277..1310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13714.2922.1mRNA_Ecto-sp13_S_contig13714.2922.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13714 2..1727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13714.2922.1 ID=prot_Ecto-sp13_S_contig13714.2922.1|Name=mRNA_Ecto-sp13_S_contig13714.2922.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp
MPGGGGSQAGVGSPAAGGEGGGAAGGLGRTSPRSSSYGYFDGEEPSWEEY
DRHVARQPGELENQPSAKGGGEKDTPLEATPSSRGAHPQQWDVWAEYLAY
EAATKRLLRELRYFLGSVDALAPTAPNMAFALESLGAEGTGTGSNGGVAR
ERPRGGGEPVQGARSLDGGVCGGGSGRAQPRVGGGIEAPLRAVPAARRAI
FVLFLVVVAQGRGGGRGRRLFLHRLS*
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