prot_Ecto-sp13_S_contig13454.2751.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13454.2751.1
Unique Nameprot_Ecto-sp13_S_contig13454.2751.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13454.2751.1 vs. uniprot
Match: A0A6H5JDC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.940e-14
Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:    1 RYNLDNCLFIFNVAGNDGGGALYLLSMEESSDLTGIVTFT 40
            RYNLDNCLFIFNVAGNDGGG LYLLSME SSDLTGIVTFT
Sbjct:  456 RYNLDNCLFIFNVAGNDGGGVLYLLSME-SSDLTGIVTFT 494
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BLAST of mRNA_Ecto-sp13_S_contig13454.2751.1 vs. uniprot
Match: D7G6U0_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U0_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.700e-11
Identity = 53/124 (42.74%), Postives = 65/124 (52.42%), Query Frame = 0 
Query:    3 NLDNCLFIFNV--AGNDGGGALYLLSMEESSDLTGIVTFTSPIFEEN---------SASGNGSITSIA-CGNVVVESESTS---EYEEDEGAFAIQNGFESCSSVAFLSTLEPGPELSGARFSD 111
            N+  CLF  N    G++G G    L         G+VT    +F  N         S+S + ++T +  C + V  S   S       DEGAF IQNGFESCSSV FL+TLE GPELSGARFSD
Sbjct:  133 NITGCLFSENTIDGGDEGDGEDGELFGGTVVAKWGVVTIDDTMFYNNKGTTWTIVCSSSTSPAMTGVEFCTSSVWRSRVISPALSLSPDEGAFVIQNGFESCSSVTFLTTLESGPELSGARFSD 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13454.2751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDC0_9PHAE3.940e-1495.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6U0_ECTSI3.700e-1142.74REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13454contigEcto-sp13_S_contig13454:193..1382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13454.2751.1mRNA_Ecto-sp13_S_contig13454.2751.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13454 192..1382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13454.2751.1 ID=prot_Ecto-sp13_S_contig13454.2751.1|Name=mRNA_Ecto-sp13_S_contig13454.2751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
RYNLDNCLFIFNVAGNDGGGALYLLSMEESSDLTGIVTFTSPIFEENSAS
GNGSITSIACGNVVVESESTSEYEEDEGAFAIQNGFESCSSVAFLSTLEP
GPELSGARFSD
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