prot_Ecto-sp13_S_contig13396.2716.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13396.2716.1
Unique Nameprot_Ecto-sp13_S_contig13396.2716.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length316
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13396.2716.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 1.870e-195
Identity = 287/315 (91.11%), Postives = 293/315 (93.02%), Query Frame = 0 
Query:    1 MASIMGGGWKGLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNCDGQISKGVSGKASYVFNKDRVLPSGLSASSSTDTVYGKAFGTVTVDPQEKTAVMEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDVRASANVLDLLGSGFGKGAIGVTYRRDLDAVAPCPCSPSLDQHTPQLHRQGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 315
            MA IMGGGWK LRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGN DGQ+SKGVSGKASYVFNKDRVLP+GLSASSSTDT YGKAFGTVTVDPQ+KTAV+EGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASD+RASANVLDL+GSGFGKGAIGVTYRRDLDAVA                  GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF
Sbjct:    1 MAGIMGGGWKWLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA------------------GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13396.2716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI1.870e-19591.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..315
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13396contigEcto-sp13_S_contig13396:708..3691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13396.2716.1mRNA_Ecto-sp13_S_contig13396.2716.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13396 708..3875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13396.2716.1 ID=prot_Ecto-sp13_S_contig13396.2716.1|Name=mRNA_Ecto-sp13_S_contig13396.2716.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MASIMGGGWKGLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRG
NCDGQISKGVSGKASYVFNKDRVLPSGLSASSSTDTVYGKAFGTVTVDPQ
EKTAVMEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQE
ATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHS
PDKASDVRASANVLDLLGSGFGKGAIGVTYRRDLDAVAPCPCSPSLDQHT
PQLHRQGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGT
GVGSTVSLRQSFRMF*
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