prot_Ecto-sp13_S_contig1336.2685.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1336.2685.1
Unique Nameprot_Ecto-sp13_S_contig1336.2685.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length184
Homology
BLAST of mRNA_Ecto-sp13_S_contig1336.2685.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 4.310e-83
Identity = 155/186 (83.33%), Postives = 159/186 (85.48%), Query Frame = 0
Query:    1 MPRQTRQASSPATNPSPSTAGSFPPAXXXXXXXXXXXXXXXXXXXXXXXXGSPEQVPADRELQYLCPRPGCNTNLSFKENIRKDRADYPACRNFSAGTCAWTGLYLIKYLGKVSWLCASEFEVGEVVWAYTIPDVERPACYINWCLNAETCIVLKEVGVPVNVRLAGEDD---VGKRCHDCKRARP 183
            MPRQ+RQASSPAT P           XXXXXXXXXXXXXXXXXXXXXXXX SPEQVPADRELQYLCPR GCNTNL  KENIRKDRADYPACRNF+AGTCAWTGL LIKY GKV WLCASEFEVGEVVWA+TIPDVERPAC+INWCLNAE CIVLK  GVPVNVRLAGEDD   VGKRC DCKRA P
Sbjct:    1 MPRQSRQASSPATKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEQVPADRELQYLCPRTGCNTNLFLKENIRKDRADYPACRNFNAGTCAWTGL-LIKYPGKVCWLCASEFEVGEVVWAHTIPDVERPACHINWCLNAEACIVLKGDGVPVNVRLAGEDDANCVGKRCRDCKRADP 185          
BLAST of mRNA_Ecto-sp13_S_contig1336.2685.1 vs. uniprot
Match: D8LET1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET1_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 8.030e-65
Identity = 102/132 (77.27%), Postives = 105/132 (79.55%), Query Frame = 0
Query:   51 GSPEQVPADRELQYLCPRPGCNTNLSFKENIRKDRADYPACRNFSAGTCAWT-GLYLIKYLGKVSWLCASEFEVGEVVWAYTIPDVERPACYINWCLNAETCIVLKEVGVPVNVRLAGEDDVGKRCHDCKRA 181
            GSPEQVPADRELQ+LCP  GCNTNL  KENI KDRADY  C    AGT A      LIKY GKV WLCASEFEVGEVVWAYT PDVERPACYINWCLN + CI+LKE G PVNVRLAGEDDV KRC DCKRA
Sbjct:   53 GSPEQVPADRELQHLCPGTGCNTNLFLKENIHKDRADY--CTT-PAGTLAPVPARLLIKYPGKVCWLCASEFEVGEVVWAYTTPDVERPACYINWCLNEDACIILKEEGAPVNVRLAGEDDVAKRCSDCKRA 181          
BLAST of mRNA_Ecto-sp13_S_contig1336.2685.1 vs. uniprot
Match: D8LKW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW7_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 4.200e-57
Identity = 89/114 (78.07%), Postives = 91/114 (79.82%), Query Frame = 0
Query:   58 ADRELQYLCPRPGCNTNLSFKENIRKDRADYPACRNFSAGTCAWTGLYLIKYLGKVSWLCASEFEVGEVVWAYTIPDVERPACYINWCLNAETCIVLKEVGVPVNVRLAGEDDV 171
            ADRE QYLCP  GCNTNL       KDRADYPACR FS GTC WTGL LIKY G V WLCASEFEVGEVVWAYTIPDVERPACYI WCLN +  I+LKE GVPVN RLAGEDDV
Sbjct:  102 ADREPQYLCPGTGCNTNL------HKDRADYPACRTFSVGTCVWTGL-LIKYPGNVCWLCASEFEVGEVVWAYTIPDVERPACYITWCLNGDAGIILKEEGVPVNARLAGEDDV 208          
BLAST of mRNA_Ecto-sp13_S_contig1336.2685.1 vs. uniprot
Match: D7FWQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ2_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.720e-14
Identity = 34/45 (75.56%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   51 GSPEQVPADRELQYLCPRPGCNTNLSFKENIRKDRADYPACRNFS 95
            GS EQVPADRE QYLCP  GCNTNL  KENI K RADYPACR  +
Sbjct:   83 GSAEQVPADRESQYLCPGTGCNTNLFLKENIHKGRADYPACRTLA 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1336.2685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KCU2_9PHAE4.310e-8383.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LET1_ECTSI8.030e-6577.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKW7_ECTSI4.200e-5778.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWQ2_ECTSI1.720e-1475.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1336contigEcto-sp13_S_contig1336:4326..6174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1336.2685.1mRNA_Ecto-sp13_S_contig1336.2685.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1336 1795..6324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1336.2685.1 ID=prot_Ecto-sp13_S_contig1336.2685.1|Name=mRNA_Ecto-sp13_S_contig1336.2685.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MPRQTRQASSPATNPSPSTAGSFPPAASTAAPTPPPARGAGSSASAGSSA
GSPEQVPADRELQYLCPRPGCNTNLSFKENIRKDRADYPACRNFSAGTCA
WTGLYLIKYLGKVSWLCASEFEVGEVVWAYTIPDVERPACYINWCLNAET
CIVLKEVGVPVNVRLAGEDDVGKRCHDCKRARP*
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