prot_Ecto-sp13_S_contig13188.2584.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13188.2584.1
Unique Nameprot_Ecto-sp13_S_contig13188.2584.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13188.2584.1 vs. uniprot
Match: D7FSM1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSM1_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.100e-73
Identity = 124/129 (96.12%), Postives = 125/129 (96.90%), Query Frame = 0 
Query:    1 MLMMRVVRQWNMARDEASVQQRRAAQLEATRLWMFMPGISLWRVLLQLVGMSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQTFADNMLSALSFLDMLLQFRTGYVDKNSKIIINPKKA 129
            MLMMRVVRQWNMARDEASVQQRRAAQLEA RLWMFMPGISLWRVLLQL GMSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQT ADNMLSALSFLDMLLQFRTGYVDKNSKIII+PKK 
Sbjct:  248 MLMMRVVRQWNMARDEASVQQRRAAQLEAKRLWMFMPGISLWRVLLQLAGMSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQTLADNMLSALSFLDMLLQFRTGYVDKNSKIIIDPKKV 376
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13188.2584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSM1_ECTSI1.100e-7396.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13188contigEcto-sp13_S_contig13188:1769..3306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13188.2584.1mRNA_Ecto-sp13_S_contig13188.2584.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13188 1628..3523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13188.2584.1 ID=prot_Ecto-sp13_S_contig13188.2584.1|Name=mRNA_Ecto-sp13_S_contig13188.2584.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp
MLMMRVVRQWNMARDEASVQQRRAAQLEATRLWMFMPGISLWRVLLQLVG
MSLLVSYCVTLTLRAFHSTRCRAAFNCDPETDPKLASLREWQTFADNMLS
ALSFLDMLLQFRTGYVDKNSKIIINPKKARGG*
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