prot_Ecto-sp13_S_contig13177.2577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13177.2577.1
Unique Nameprot_Ecto-sp13_S_contig13177.2577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: D8LBG8_ECTSI (Indole-3-glycerol-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBG8_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.670e-94
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILGDPKGEKML 161
            VKR APVTGKLRRGEFDVVE SRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQML+ALNLPGIRAVSISNRDMATWALDTSRVERILGDP+ +K L
Sbjct:  692 VKRTAPVTGKLRRGEFDVVELSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLVALNLPGIRAVSISNRDMATWALDTSRVERILGDPEVQKGL 852          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: A0A7S2XZ57_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ57_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.980e-42
Identity = 73/156 (46.79%), Postives = 109/156 (69.87%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRS-AVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILGDP 155
            +K+ +P +G+LR   FD V  +   + +GVAA+++ T+ +FFGCSYEDL  I++ A   PV+CSD  +YPYQIY+ R+AGADA+K++A  LP  DL YFHKI+ A+GM+ IV VS+ +Q+   L +P I  +SI NR++A W +   RVE+++  P
Sbjct:  206 IKKFSPNSGELR-DSFDEVAIASQYKSSGVAALSIVTEKQFFGCSYEDLKEIKAIAPDLPVICSDFFIYPYQIYKTRMAGADAIKILAAGLPDTDLPYFHKIARAVGMKVIVGVSTTRQLEQVLKIPDIEMISIVNRNLANWKVQKGRVEKLMNHP 360          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: A0A835ZFI7_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.200e-40
Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILG 153
            VK ++P   ++R G +     ++  E  G AA+AV TD  FFG + EDL ++++AV  PV+  D+VVY YQ+YQARL GADA++L+A ALP  DL  FHK++  +GMQ +V+VSS K +L AL + G+R VSI+ RD+ATW LD  R  R+LG
Sbjct:  613 VKCRSPGGLEIRAGGYTAAALAQDAERGGAAAVAVQTDSVFFGGAAEDLAAVKAAVGVPVLWMDLVVYVYQLYQARLDGADAVRLVAAALPTADLSLFHKVATKIGMQAVVTVSSEKHLLAALAIDGVRLVSITQRDLATWELDPERAARLLG 765          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: A0A7R9U7N0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7N0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.350e-34
Identity = 80/179 (44.69%), Postives = 113/179 (63.13%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSV---KQMLMALNLPG--IRAVSISNRDMATWALDTSRVERILGDPKGEKM---------LLLSE 165
            +K+  P  G +R  +++V   S++ EGAG AA++V  D +FFG SYEDLT+ R A S PV+ SD V+YPYQIYQAR AGADAL+L + ALP+ DL+YFHKI  A GM  +V  SS+   +++L AL+     ++A+ +S RD   +     RV  +L   +G+K+         LLLSE
Sbjct:  115 LKKSHPFKGVIRP-DYNVEALSKTFEGAGAAALSVCVDNRFFGGSYEDLTAARGATSLPVISSDFVLYPYQIYQARSAGADALRLTSAALPSSDLIYFHKIIAAQGMDPVVVCSSLTEAEEVLEALHGSNQTVKAMVLSGRDYTDFNASPERVVGMLKSGRGQKLKDRLQEDGALLLSE 292          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: A0A8J7KR49_9CYAN (Indole-3-glycerol phosphate synthase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7KR49_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 1.930e-34
Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILGDPKGEKM 160
            VK+ +P  G + +  FD +  ++S    G A I+V TD +FF  S+E L  IR+AV  P++C D V+YPYQIY ARL GADA+ LIA  L  KDL YF KI++ALGM  +V V +++++   L L G+R + I+NR++ T+ +D +  E++L   +GE++
Sbjct:   85 VKKASPSKGVICKN-FDPIRIAQSYVAGGAACISVLTDSEFFQGSFEYLKQIRAAVDIPLLCKDFVIYPYQIYWARLHGADAVLLIAAILSDKDLQYFLKIASALGMAALVEVHTLEELDRVLGLSGVRLIGINNRNLETFTVDLNTTEQLLA-ARGEQI 242          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: TRPC_SYNE7 (Indole-3-glycerol phosphate synthase n=5 Tax=Synechococcus elongatus TaxID=32046 RepID=TRPC_SYNE7)

HSP 1 Score: 131 bits (329), Expect = 2.320e-34
Identity = 69/165 (41.82%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILGDPKGEKMLLLSE 165
            VK+ +P  G LR  +FD V  +++    G A I+V TD KFF   +E+L  +R+AV  P++C D V+YPYQIY+ARL GADA+ LIA  L   DL YF KI+++LG+  +V V S+ ++   L L  +R V I+NR++ T+  D +  E +    +   +LL+SE
Sbjct:   86 VKKASPSKGVLRE-DFDPVAIAQAYAANGAACISVLTDEKFFQGGFENLQRVRAAVDVPLLCKDFVIYPYQIYKARLLGADAVLLIAAILSDADLRYFLKIAHSLGLNALVEVHSLPELERVLALDDLRLVGINNRNLKTFVTDLAVTEHLAAQCRDRDLLLVSE 249          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: B4WHU9_SYNS7 (Indole-3-glycerol phosphate synthase n=1 Tax=Synechococcus sp. (strain ATCC 29403 / PCC 7335) TaxID=91464 RepID=B4WHU9_SYNS7)

HSP 1 Score: 129 bits (325), Expect = 4.120e-34
Identity = 69/166 (41.57%), Postives = 106/166 (63.86%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMA--TWALDTSR-VERILGDPKGEKMLLL 163
            VK+ +P  G +R  +FD +E ++S +  G A ++V TD +FF  S+  L+ IR AV  P++C + ++YPYQIYQARLAGADA+ LIA  L  KD+ YF KI+  LG+  +V   +V++    +++ G+  V I+NR++   T +L+T+R V    GD   +K LLL
Sbjct:   52 VKKASPSKGVIRE-DFDPIEIAKSYQSGGAACLSVLTDSEFFQGSFTYLSQIRQAVDLPLLCKEFIIYPYQIYQARLAGADAILLIAAILTDKDIGYFTKIAKVLGLDALVETHTVEEFERVISIDGVELVGINNRNLEDFTVSLETTRQVVEKFGDAIAQKQLLL 216          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: UPI0019E3B63D (Indole-3-glycerol phosphate synthase TrpC n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI0019E3B63D)

HSP 1 Score: 130 bits (327), Expect = 4.600e-34
Identity = 68/169 (40.24%), Postives = 108/169 (63.91%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERILG----DPKGEKMLLLSE 165
            VK+ +P  G +R  +FD V  ++S    G A I+V TD +FF  S+E LT IR+AV  P++C D ++YPYQIY+ARLAGADA  LIA  L  KDL YF KI N++GM  ++ V +++++   L L G++ + I+NR++  +++      ++L     + K + +L++SE
Sbjct:   85 VKKASPSKGVIR-ADFDPVAIAQSYAAGGAACISVLTDQRFFQGSFEYLTQIRAAVDIPLLCKDFLIYPYQIYKARLAGADAALLIAAILSDKDLQYFLKIINSIGMTALIEVHTLEELDRVLQLEGVKLIGINNRNLEDFSVSLDTTCQLLSARMQELKAQNILVVSE 252          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: A0A8J6SSH6_9CYAN (Indole-3-glycerol phosphate synthase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SSH6_9CYAN)

HSP 1 Score: 129 bits (325), Expect = 8.920e-34
Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVERIL 152
            VK+ +P  G +R  +FD V  ++S +  G A I+V TD KFF  S++ L  IR+AV  P++C D V+YPYQIY AR  GADA+ LIA  L  KDL YF KI+NALGM  ++ V ++ +M   L L G+  V I+NR++  +++D     +I+
Sbjct:   85 VKKASPSKGVIRE-DFDPVAIAQSYQQGGAACISVLTDQKFFQGSFDYLQEIRAAVDVPLLCKDFVIYPYQIYMARAQGADAVLLIAAILSDKDLQYFLKITNALGMTALIEVHTLAEMDRVLALQGVTLVGINNRNLEDFSVDLQTTRQIM 235          
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Match: UPI000570561D (indole-3-glycerol phosphate synthase TrpC n=2 Tax=Cyanobacteria TaxID=1117 RepID=UPI000570561D)

HSP 1 Score: 129 bits (325), Expect = 9.330e-34
Identity = 69/166 (41.57%), Postives = 106/166 (63.86%), Query Frame = 0
Query:    1 VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLTSIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHKISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMA--TWALDTSR-VERILGDPKGEKMLLL 163
            VK+ +P  G +R  +FD +E ++S +  G A ++V TD +FF  S+  L+ IR AV  P++C + ++YPYQIYQARLAGADA+ LIA  L  KD+ YF KI+  LG+  +V   +V++    +++ G+  V I+NR++   T +L+T+R V    GD   +K LLL
Sbjct:   87 VKKASPSKGVIRE-DFDPIEIAKSYQSGGAACLSVLTDSEFFQGSFTYLSQIRQAVDLPLLCKEFIIYPYQIYQARLAGADAILLIAAILTDKDIGYFTKIAKVLGLDALVETHTVEEFERVISIDGVELVGINNRNLEDFTVSLETTRQVVEKFGDAIAQKQLLL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13177.2577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBG8_ECTSI1.670e-9495.65Indole-3-glycerol-phosphate synthase n=2 Tax=Ectoc... [more]
A0A7S2XZ57_9STRA3.980e-4246.79Indole-3-glycerol-phosphate synthase n=1 Tax=Fibro... [more]
A0A835ZFI7_9STRA2.200e-4049.02Indole-3-glycerol-phosphate synthase n=1 Tax=Tribo... [more]
A0A7R9U7N0_9STRA1.350e-3444.69Indole-3-glycerol-phosphate synthase n=1 Tax=Pingu... [more]
A0A8J7KR49_9CYAN1.930e-3443.13Indole-3-glycerol phosphate synthase n=2 Tax=Pseud... [more]
TRPC_SYNE72.320e-3441.82Indole-3-glycerol phosphate synthase n=5 Tax=Synec... [more]
B4WHU9_SYNS74.120e-3441.57Indole-3-glycerol phosphate synthase n=1 Tax=Synec... [more]
UPI0019E3B63D4.600e-3440.24Indole-3-glycerol phosphate synthase TrpC n=1 Tax=... [more]
A0A8J6SSH6_9CYAN8.920e-3444.08Indole-3-glycerol phosphate synthase n=3 Tax=Cyano... [more]
UPI000570561D9.330e-3441.57indole-3-glycerol phosphate synthase TrpC n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..165
e-value: 5.1E-45
score: 155.5
IPR013798Indole-3-glycerol phosphate synthasePFAMPF00218IGPScoord: 1..156
e-value: 1.6E-28
score: 99.6
NoneNo IPR availablePANTHERPTHR22854TRYPTOPHAN BIOSYNTHESIS PROTEINcoord: 1..159
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 1..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13177contigEcto-sp13_S_contig13177:31..1205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13177.2577.1mRNA_Ecto-sp13_S_contig13177.2577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13177 31..1205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13177.2577.1 ID=prot_Ecto-sp13_S_contig13177.2577.1|Name=mRNA_Ecto-sp13_S_contig13177.2577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
VKRKAPVTGKLRRGEFDVVEFSRSLEGAGVAAIAVNTDPKFFGCSYEDLT
SIRSAVSTPVMCSDVVVYPYQIYQARLAGADALKLIAPALPAKDLMYFHK
ISNALGMQCIVSVSSVKQMLMALNLPGIRAVSISNRDMATWALDTSRVER
ILGDPKGEKMLLLSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR013798Indole-3-glycerol_P_synth
IPR011060RibuloseP-bd_barrel