prot_Ecto-sp13_S_contig13125.2544.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig13125.2544.1
Unique Name	prot_Ecto-sp13_S_contig13125.2544.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	94

Homology

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: D7FQU1_ECTSI (Intraflagellar transport particle protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU1_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.430e-53
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPVQ 91
            REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPVQ
Sbjct:  146 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPVQ 236

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S2CJ00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJ00_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.240e-34
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0

Query:    7 IKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            IK YRMALDQ+P TGKE+RFKI RNIG AFVR+GQFQDAI  Y+TIM GN D QTGFNLVLCYYAL D   MK+ F +L +IP+
Sbjct:   81 IKMYRMALDQIPPTGKEIRFKIFRNIGNAFVRLGQFQDAIQSYETIMAGNADFQTGFNLVLCYYALGDADKMKRGFAKLLSIPI 164

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S2CJI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJI7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.560e-34
Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 0

Query:    7 IKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            IK YRMALDQ+P TGKE+RFKI RNIG AFVR+GQFQDAI  Y+TIM GN D QTGFNLVLCYYAL D   MK+ F +L +IP+
Sbjct:   81 IKMYRMALDQIPPTGKEIRFKIFRNIGNAFVRLGQFQDAIQSYETIMAGNADFQTGFNLVLCYYALGDADKMKRGFAKLLSIPI 164

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S4HSQ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HSQ6_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 6.220e-34
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAI 88
            ++Y  AIK YRMALDQ+PNTG+EVR+KI+RNIG AFVR+GQFQDAI  ++ IM+G+PD QTGFNLVLCYYA  +   MKK F RL ++
Sbjct:   72 KKYSAAIKMYRMALDQIPNTGREVRYKIMRNIGNAFVRLGQFQDAIASFEQIMEGSPDLQTGFNLVLCYYAAGEKERMKKGFSRLLSV 159

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A835Z9Y6_9STRA (Intraflagellar transport particle protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.550e-34
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 0

Query:    2 EYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            +Y EA+K YRMALDQ PNTG EVR KI RNIGTAFVRMGQ+QDAIG Y+T+M G+PD  TG NL+LC+YALED   MK+AFQRL AI +
Sbjct:  156 DYLEAVKCYRMALDQTPNTGSEVRSKIFRNIGTAFVRMGQYQDAIGAYETVMSGSPDVLTGLNLLLCHYALEDAAQMKRAFQRLVAIAI 244

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S1C9E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9E8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.110e-33
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            R+YP AIK YRMALDQ+PNT KE R KI+RNIG AFVRMGQFQDAIG ++ IM+GNP  QTGFNLV+CYYA  D   MKK F +L +IP+
Sbjct:  225 RKYPVAIKMYRMALDQIPNTNKETRLKIMRNIGNAFVRMGQFQDAIGSFEAIMEGNPGFQTGFNLVVCYYARGDADKMKKGFTQLLSIPM 314

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S3XYV1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV1_HETAK)

HSP 1 Score: 129 bits (323), Expect = 8.020e-33
Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            ++YP AIK YRMALDQ+PNTGKE+RFKI RNIG AFVR+GQ+QDAI  Y+TIM G PD QTGFNLV+CY+A ++   M+K F +L  IPV
Sbjct:  148 KKYPNAIKMYRMALDQIPNTGKEIRFKIFRNIGNAFVRLGQYQDAIQSYETIMGGAPDFQTGFNLVVCYFARQNAELMRKGFLKLLGIPV 237

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S4B2R6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2R6_CHRCT)

HSP 1 Score: 129 bits (323), Expect = 1.140e-32
Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAI 88
            ++YP AIK YRMALDQ+PNTGKE++ KI+RNIG AFVR+GQFQDA+  Y+ IM+G+PD QTGFNLVLCYYAL D   M+K F RL ++
Sbjct:  248 QKYPAAIKMYRMALDQIPNTGKEIKHKIVRNIGNAFVRLGQFQDALASYEQIMEGSPDLQTGFNLVLCYYALGDKERMRKGFSRLLSV 335

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A7S1XKY4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKY4_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.880e-32
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPV 90
            R Y +AIK YRMALDQ+PNTGKE+RFKI RNIG AF+R+GQ+QDAI  Y+TIM G PD QT FNL+LCY+AL D   M++ FQR  +IP+
Sbjct:  248 RNYLQAIKMYRMALDQIPNTGKELRFKIFRNIGNAFIRLGQYQDAIQSYETIMSGVPDFQTAFNLILCYFALGDADRMRRGFQRALSIPI 337

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BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Match: A0A0G4FEP3_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEP3_VITBC)

HSP 1 Score: 127 bits (320), Expect = 2.890e-32
Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 0

Query:    1 REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAI 88
            ++YP AIK YRMALDQ+PNTGKE+R+KI+RNIG AF RMGQF DAI  Y+ IMQGNPD QTGFNL+LCY+AL D   +K+ F RL +I
Sbjct:  233 QKYPTAIKMYRMALDQIPNTGKEIRYKILRNIGHAFFRMGQFSDAIDAYENIMQGNPDFQTGFNLLLCYFALGDKDKLKQGFTRLLSI 320

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig13125.2544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQU1_ECTSI	1.430e-53	100.00	Intraflagellar transport particle protein n=2 Tax=...	[more]
A0A7S2CJ00_9STRA	1.240e-34	71.43	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2CJI7_9STRA	4.560e-34	71.43	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S4HSQ6_9EUKA	6.220e-34	65.91	Hypothetical protein (Fragment) n=1 Tax=Prymnesium...	[more]
A0A835Z9Y6_9STRA	8.550e-34	70.79	Intraflagellar transport particle protein n=1 Tax=...	[more]
A0A7S1C9E8_9STRA	3.110e-33	68.89	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S3XYV1_HETAK	8.020e-33	66.67	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S4B2R6_CHRCT	1.140e-32	67.05	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A7S1XKY4_9STRA	2.880e-32	65.56	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A0G4FEP3_VITBC	2.890e-32	68.18	Uncharacterized protein n=3 Tax=Vitrella brassicaf...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..89 e-value: 2.1E-10 score: 43.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 2..87
None	No IPR available	PANTHER	PTHR44117	FAMILY NOT NAMED	coord: 1..90
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..59 score: 14.414
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 1..20 score: 5.812
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 26..59 score: 9.499

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig13125	contig	Ecto-sp13_S_contig13125:523..1207 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig13125.2544.1	mRNA_Ecto-sp13_S_contig13125.2544.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig13125 523..1207 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig13125.2544.1 ID=prot_Ecto-sp13_S_contig13125.2544.1|Name=mRNA_Ecto-sp13_S_contig13125.2544.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=94bp
REYPEAIKNYRMALDQVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYD
TIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIPVQVL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat