prot_Ecto-sp13_S_contig13120.2542.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13120.2542.1
Unique Nameprot_Ecto-sp13_S_contig13120.2542.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13120.2542.1 vs. uniprot
Match: A0A2I7R0R9_9CAUD (GIY-YIG nuclease superfamily protein n=1 Tax=Vibrio phage 1.097.O._10N.286.49.B3 TaxID=1881383 RepID=A0A2I7R0R9_9CAUD)

HSP 1 Score: 56.6 bits (135), Expect = 9.910e-8
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0 
Query:    5 VYVLKLEDGCWFVGLADNISETVALHREQ-QFDGWTQAHKASQVVTREMAPMVKRQKDLARWERLETMNIARQHGVDRVRGYNWT 88
            VYV++LEDGCW++G   +I + + LH        WT+ HK  +VV  E     +R+ +L       T+ +AR++G  +VRG  WT
Sbjct:    5 VYVIRLEDGCWYIGYTTDIKQRINLHLNTVSGPKWTKLHKPIEVVHIEECDGPEREVEL-------TLELARRYGCAQVRGGAWT 82
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BLAST of mRNA_Ecto-sp13_S_contig13120.2542.1 vs. uniprot
Match: A0A1Y5I9J6_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I9J6_OSTTA)

HSP 1 Score: 57.0 bits (136), Expect = 2.500e-7
Identity = 34/112 (30.36%), Postives = 54/112 (48.21%), Query Frame = 0 
Query:    4 GVYVLKLEDGCWFVGLADNISETVALHREQQFDGWTQAHKASQVVTREMAPMVKRQKDLARWERLETMNIARQHGVDRVRGYNWTGCYLTDSERQDFVRAVRHHIGVCERCG 115
            GVYVL+L  G ++VG + +I + V  H         + H     + ++  P+   Q+DL  WER ET+    QHG+ RVRG+ + G  L+  +             +C +CG
Sbjct:    5 GVYVLELNSGWFYVGSSGDIDKRVEQHENSLL---VRVHGG---IYKKHPPVKPCQEDLRSWERAETLERMMQHGISRVRGWEFQGDTLSLDKLHTIKNLFIGDFDLCRKCG 110
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BLAST of mRNA_Ecto-sp13_S_contig13120.2542.1 vs. uniprot
Match: A0A7Z0TV98_9GAMM (GIY-YIG nuclease family protein n=1 Tax=Luteimonas deserti TaxID=2752306 RepID=A0A7Z0TV98_9GAMM)

HSP 1 Score: 49.3 bits (116), Expect = 6.390e-5
Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 0 
Query:    5 VYVLKLEDGCWFVGLADNISETVALHREQQFDGWTQAHKASQVVTREMAPMVKRQKDLARWERLE---TMNIARQHGVDRVRGYNWTG-CYLTDSERQDFVRAVRHH 107
            VYVL+L+DGC++VG +    E +  H   +   WT+ H   +V+    A  VK  +D    ER+E   T+ + R HG  RVRG  W+  C ++ +      R + HH
Sbjct:   15 VYVLELQDGCYYVGQSCKFRERIYQHFTNKGSAWTRLHPPVKVIC---AKTVKT-RDWKVAERIENRLTIFLMRHHGWTRVRGGFWSNTCEISTA------RNLEHH 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13120.2542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2I7R0R9_9CAUD9.910e-836.47GIY-YIG nuclease superfamily protein n=1 Tax=Vibri... [more]
A0A1Y5I9J6_OSTTA2.500e-730.36Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
A0A7Z0TV98_9GAMM6.390e-533.64GIY-YIG nuclease family protein n=1 Tax=Luteimonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 3..87
e-value: 4.2E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13120contigEcto-sp13_S_contig13120:626..1404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13120.2542.1mRNA_Ecto-sp13_S_contig13120.2542.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13120 626..1404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13120.2542.1 ID=prot_Ecto-sp13_S_contig13120.2542.1|Name=mRNA_Ecto-sp13_S_contig13120.2542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
NGPGVYVLKLEDGCWFVGLADNISETVALHREQQFDGWTQAHKASQVVTR
EMAPMVKRQKDLARWERLETMNIARQHGVDRVRGYNWTGCYLTDSERQDF
VRAVRHHIGVCERCGKGFHVYH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035901GIY-YIG_endonuc_sf