prot_Ecto-sp13_S_contig13072.2515.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13072.2515.1
Unique Nameprot_Ecto-sp13_S_contig13072.2515.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length641
Homology
BLAST of mRNA_Ecto-sp13_S_contig13072.2515.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 784 bits (2025), Expect = 2.750e-270
Identity = 544/654 (83.18%), Postives = 559/654 (85.47%), Query Frame = 0
Query:    4 VKQEPKGDAKEQALREALLSADGPSKILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESTPSSGLASTAASAMEGSVAADGERAAMGPSKTEGEGXXXXXXXX-EGPESDGADAGGAAGDAERPAAALESRDQSSMAPTATLSTATVRQGGEPFNNQQGQAGTGATTTTGIEVPGVEGDTPEEPEAAGGSVKTKDAALAGSVPRSSEGAGGVEE-VGAPAAA--VGSSSNKGTATAAFDMEEVRSDQRFEQLVEIIECVAKDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQEAAAAAAFSAAEDIGGNPG----------EGEGGANGEKATVTGGTQDGISSPSSSDSPQEGGLGSGSGTPAEGHDDGQFSGVEGGNAXXXXXXX--ADAVDKATTGAASVKKQVAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRASGRMTAKDASILAWAYGMLDLRPARVIEALTHEGLATVKQATPHDLANLAWGLAKAGAGXXXXXXXXXEDPVASAASEDSGYGXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGLGWVKSRLERGSGPEGDGEE 641
            VKQEPKGDAKE+ALREALLSADGPSKILRE ERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAES PSSGLASTAASA+EGSVAADGER+A+GPSKT GEGXXXXXXXX E PE             ERPAAA ES DQSS  PTATLS AT RQGGEPFNN+QGQAGTGA T TGIEVPGV+GDTPEE  AAG SVKTKD ALAGSVPRSSEG GGVEE VG PAAA  VGSS NKG  TAAFDMEEVRSDQRFEQLVEIIECV+KDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQEAA AA                       EGEGGANG+K TV GG +DGISSPSSSDSPQEGGLGSGSG PAEGHDDGQ SG+EGGN XXXXXXX  A+AVDKATTGAAS KK+ AVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQ RLHPEMMAGVGREIVSSRASGRM AKDASILAWAYGML LRPARVIEALT EGLATV++ATPHDL+NLAWGLAKAGA XXXXXXXXX               XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WGLGWVKSR ERGSGPEGDGEE
Sbjct:   78 VKQEPKGDAKEKALREALLSADGPSKILREAERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGSVAADGERSAVGPSKTGGEGXXXXXXXXXERPERXXXXXXXXXXXXERPAAATESGDQSSTTPTATLSAATARQGGEPFNNEQGQAGTGAATGTGIEVPGVKGDTPEEAGAAGESVKTKDPALAGSVPRSSEGGGGVEEEVGTPAAAASVGSSPNKGATTAAFDMEEVRSDQRFEQLVEIIECVSKDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQEAATAAXXXXXXXXXXXXXXXXXXXXXXXEGEGGANGQKVTVAGGAEDGISSPSSSDSPQEGGLGSGSGKPAEGHDDGQLSGIEGGNXXXXXXXXXXAEAVDKATTGAASPKKRDAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQHRLHPEMMAGVGREIVSSRASGRMAAKDASILAWAYGMLGLRPARVIEALTREGLATVQEATPHDLSNLAWGLAKAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGLGWVKSRWERGSGPEGDGEE 731          
BLAST of mRNA_Ecto-sp13_S_contig13072.2515.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 708 bits (1828), Expect = 3.060e-242
Identity = 448/564 (79.43%), Postives = 467/564 (82.80%), Query Frame = 0
Query:   29 KILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESTPSSGLASTAASAMEGSVAADGERAAMGPSKTEGEGXXXXXXXXEGPESDGADAGGAAGDAERPAAALESRDQSSMAPTATLSTATVRQGGEPFNNQQGQAGTGATTTTGIEVPGVEGDTPEEPEAAGGSVKTKDAALAGSVPRSSEGAGGVEEVGAPAAAVGSSSNKGTATAAFDMEEVRSDQRFEQLVEIIECVAKDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQEAAAAAAFSAAEDIGGNPGEG------EGGANGEKATVTGGTQDGISSPSSSDSPQEGGLGSGSGTPAEGHDDGQFSGVEGGNAXXXXXXXA-----DAVDKATTGAASVKKQVAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRASGRMTAKDASILAWAYGMLDLRPARVIEALTHEGLATVKQATPHDLANLAWGLAKAGAGXXXXXXXXXEDPVASAASEDSGYG 581
            +ILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAES PSSGLASTAASA+EGSVAADGERAA+GPSK  G G        E PES GA+A       E+PAAA ESRDQSS APTATLS ATVRQGG+PFNN+QGQA TGATT TGIEVPGV GD P+EP AAG SVKTKDAALAG VPRS EGAGGVEE GAPAAAVGSS +KGT TAAFDMEEVRSDQRFEQLVEIIECVAKDLSV      VWGLSILGHVPRNSLLESLATFLTDRLRQEA                         E GA+G KA V G T+DGISSPS+ DS QEGGLGSGSG PAEG + GQ SG+EG NA  XXXXX      + VDKATTGAAS KKQ AVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRA G M AKDASILAWAYGML LRP+RVIEALT EGLATV++ATPHDL+NLAWGLAKAGAG XXXXXXX EDPVASAASEDSG G
Sbjct:    9 RILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGSVAADGERAAVGPSKAGGRGKRGAV---ERPESGGAEA-------EKPAAATESRDQSSTAPTATLSAATVRQGGDPFNNEQGQADTGATTGTGIEVPGVMGDDPQEPGAAGESVKTKDAALAGGVPRSPEGAGGVEEFGAPAAAVGSSPHKGTTTAAFDMEEVRSDQRFEQLVEIIECVAKDLSV------VWGLSILGHVPRNSLLESLATFLTDRLRQEAXXXXXXXXXXXXXXXXXXXXXXXXDEHGADGGKAAVGGSTEDGISSPSTGDSLQEGGLGSGSGKPAEGLNRGQLSGIEGDNAGGXXXXXXXXXXXEGVDKATTGAASAKKQDAVACTSGTDLATAALSFAYAHARLDISTGELLEVIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRAFGHMAAKDASILAWAYGMLGLRPSRVIEALTREGLATVQEATPHDLSNLAWGLAKAGAGGXXXXXXXVEDPVASAASEDSGSG 556          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13072.2515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY5_ECTSI2.750e-27083.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR07_9PHAE3.060e-24279.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21228:SF40TRANSFORMING GROWTH FACTOR BETA REGULATOR 4coord: 23..584
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 23..584

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13072contigEcto-sp13_S_contig13072:2..4846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13072.2515.1mRNA_Ecto-sp13_S_contig13072.2515.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13072 2..4846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13072.2515.1 ID=prot_Ecto-sp13_S_contig13072.2515.1|Name=mRNA_Ecto-sp13_S_contig13072.2515.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=641bp
AAAVKQEPKGDAKEQALREALLSADGPSKILREVERIPALRRLSDSALRV
TSATPSDGRLAALALYRLGAAARAAESTPSSGLASTAASAMEGSVAADGE
RAAMGPSKTEGEGRGGGGGGGEGPESDGADAGGAAGDAERPAAALESRDQ
SSMAPTATLSTATVRQGGEPFNNQQGQAGTGATTTTGIEVPGVEGDTPEE
PEAAGGSVKTKDAALAGSVPRSSEGAGGVEEVGAPAAAVGSSSNKGTATA
AFDMEEVRSDQRFEQLVEIIECVAKDLSVSDTSKVVWGLSILGHVPRNSL
LESLATFLTDRLRQEAAAAAAFSAAEDIGGNPGEGEGGANGEKATVTGGT
QDGISSPSSSDSPQEGGLGSGSGTPAEGHDDGQFSGVEGGNAGGGGGGGA
DAVDKATTGAASVKKQVAVACTSGTDLATAALSFAYAHARLDISTGELLE
VIAACATPQLAAMPLRDLANLSWAFAVQRRLHPEMMAGVGREIVSSRASG
RMTAKDASILAWAYGMLDLRPARVIEALTHEGLATVKQATPHDLANLAWG
LAKAGAGGGGKEEEEVEDPVASAASEDSGYGGGAGKEAKAGEEAEASGLG
ENGGASGGGGDADGGGGGAWGLGWVKSRLERGSGPEGDGEE
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