prot_Ecto-sp13_S_contig13036.2492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13036.2492.1
Unique Nameprot_Ecto-sp13_S_contig13036.2492.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13036.2492.1 vs. uniprot
Match: A0A6H5JI95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI95_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.440e-29
Identity = 123/154 (79.87%), Postives = 124/154 (80.52%), Query Frame = 0 
Query:    1 MVSATPTTAPSGRPKRAAASKAEHVFRSLALTGAVQSGACVVDSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXEEASTHHCERGEGTELEAPIAGEGGNHVYEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASSRGAKKRGKLKQETAAVR 154
            MVSATPTTAPSGRPKRAAASKAEHVFRSLALTGAVQSG CVVDSEQ XXXXXXXXXXXXXXXXXXXXXXXX   EASTH  E GEGTELEA IA EGG + YE                XXXXXXXXXXXX  SASSRGAKKRGKLKQETAAVR
Sbjct:    1 MVSATPTTAPSGRPKRAAASKAEHVFRSLALTGAVQSGGCVVDSEQQXXXXXXXXXXXXXXXXXXXXXXXX---EASTHQGEGGEGTELEASIAREGGINDYEV-----RGEGVSAAGGXXXXXXXXXXXXKRSASSRGAKKRGKLKQETAAVR 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13036.2492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI95_9PHAE2.440e-2979.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13036contigEcto-sp13_S_contig13036:537..998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13036.2492.1mRNA_Ecto-sp13_S_contig13036.2492.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13036 537..998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13036.2492.1 ID=prot_Ecto-sp13_S_contig13036.2492.1|Name=mRNA_Ecto-sp13_S_contig13036.2492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MVSATPTTAPSGRPKRAAASKAEHVFRSLALTGAVQSGACVVDSEQQQEQ
QQQEQQEQQEQPTESNKAPAGGGEEASTHHCERGEGTELEAPIAGEGGNH
VYEAGGGGVSAAGGGEGSGGGSGNHRQKQTKRRSASSRGAKKRGKLKQET
AAVR
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