prot_Ecto-sp13_S_contig13012.2476.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13012.2476.1
Unique Nameprot_Ecto-sp13_S_contig13012.2476.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length511
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13012.2476.1 vs. uniprot
Match: D7FQ05_ECTSI (Ankyrin repeat domain 16 isoform 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ05_ECTSI)

HSP 1 Score: 860 bits (2223), Expect = 9.580e-301
Identity = 474/512 (92.58%), Postives = 483/512 (94.34%), Query Frame = 0 
Query:    1 VDARGGVEDRSPLFLAALAKRWDACTWLLEVGASKIIRDKRGLTAYQAMAASSDPEVAERSGMLTDPPQRVVSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYLVEWRPMRSRPVCPAHSRHVAERVRPLRKGKKKRGRAGWQGAEIRPGTAEEACTTSHQAFSTGGNRDARGAASASSLRRPNTGGGETTADEALPWKRRGVEIFPLRLKHLYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAPKEAAHMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAKAGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSASKTHTEATQAPAEAPACFGSRVESGSAEESGVKLPSVSGGGSGTG-TMNEDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDDSWILCSR 511
            VDARGG EDRSPLFLAALAKRWDACTWLLEVGASKIIRDK+GLTAYQAMAASSDPEVAERSGMLTDPPQR+VSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYLVEWRPMRSRPVCPAHSRHVAERVRP RKGKKKRGRAGWQGAEIRPGTAEEACTTSHQAFS GG+RDA GAASASSLRRPNTGGGETTADEALPWKRR VE FPLRLKHLYPATNY+VRVSA+TLAGYGVPSREALLRTRVSPPSAPKEAA+MVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAK GSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          ATQAPAE PAC GS VESGS EES VKLPSVSGG       M+EDKK+IGVWIGRRTDKLSP+HTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDDSWILCSR
Sbjct:  273 VDARGGAEDRSPLFLAALAKRWDACTWLLEVGASKIIRDKKGLTAYQAMAASSDPEVAERSGMLTDPPQRIVSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYLVEWRPMRSRPVCPAHSRHVAERVRPPRKGKKKRGRAGWQGAEIRPGTAEEACTTSHQAFSMGGDRDALGAASASSLRRPNTGGGETTADEALPWKRREVEAFPLRLKHLYPATNYMVRVSAQTLAGYGVPSREALLRTRVSPPSAPKEAANMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAKTGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXATQAPAETPACVGSGVESGSTEESRVKLPSVSGGXXXXXXAMDEDKKKIGVWIGRRTDKLSPYHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDDSWILCSR 783
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BLAST of mRNA_Ecto-sp13_S_contig13012.2476.1 vs. uniprot
Match: A0A6H5KFL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL4_9PHAE)

HSP 1 Score: 786 bits (2030), Expect = 1.680e-272
Identity = 444/513 (86.55%), Postives = 450/513 (87.72%), Query Frame = 0 
Query:    1 VDARGGVEDRSPLFLAALAKRWDACTWLLEVGASKIIRDKRGLTAYQAMAASSDPEVAERSGMLTDPPQRVVSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYLVEWRPMRSRPVCPAHSRHVAERVRPLRKGKKKRGRAGWQGAEIRPGTAEEACTTSHQAFSTGGNRDARGAASASSLRRPNTGGGETTADEALPWKRRGVEIFPLRLKHLYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAPKEAAHMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAKAGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSASKTHT--EATQAPAEAPACFGSRVESGSAEESGVKLPSVSGGGSGTGTMNEDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDDSWILCSR 511
            VDARGG EDRSPLFLAALAKRWDACTWLLEVGASKIIRDK+GLTAYQAMAASSDPEVAERSGMLTDPPQR+VSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYL                                       GA+IRPGTAEEACTTSHQAFSTGG RDA GAASASSLRRPNTGGGETTADE  PWKRR VE FPLRLKHLYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAPKEA +MVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAK GSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           EATQA AEAPACFGSRVESGS EES VKLPSVSGGGSGTGTM+EDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQML+RWFNKPDGDVLRWELSRRVFKYGTDFRGDND SWILCSR
Sbjct:  232 VDARGGAEDRSPLFLAALAKRWDACTWLLEVGASKIIRDKKGLTAYQAMAASSDPEVAERSGMLTDPPQRIVSVSCRGITHNTLDLTWSEPLRSYDEEVFVGYL---------------------------------------GAKIRPGTAEEACTTSHQAFSTGGGRDALGAASASSLRRPNTGGGETTADETFPWKRREVETFPLRLKHLYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAPKEAVNMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGRVLAKTGSSELLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATQATAEAPACFGSRVESGSTEESRVKLPSVSGGGSGTGTMDEDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPSSDALEAQDIILPIKRGATQMLIRWFNKPDGDVLRWELSRRVFKYGTDFRGDNDGSWILCSR 705
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BLAST of mRNA_Ecto-sp13_S_contig13012.2476.1 vs. uniprot
Match: A0A7S1XYK0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYK0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.160e-7
Identity = 33/78 (42.31%), Postives = 49/78 (62.82%), Query Frame = 0 
Query:  213 LYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAPKEAAHMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLD 290
            L+PAT Y  ++ A + AG  +PS    L T   PPSAP +  + ++ T  SI+V WV  K++NGEPI  YE+QR +++
Sbjct:  504 LFPATAYAFQICAMSDAGESLPSDTQHLVTAAYPPSAPSKP-YSIATTSTSISVAWVASKFDNGEPIEGYEVQRKLIE 580
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13012.2476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ05_ECTSI9.580e-30192.58Ankyrin repeat domain 16 isoform 2 n=1 Tax=Ectocar... [more]
A0A6H5KFL4_9PHAE1.680e-27286.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1XYK0_9STRA4.160e-742.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 65..232
e-value: 9.6E-8
score: 41.7
coord: 247..445
e-value: 8.6E-6
score: 35.2
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 363..459
score: 6.352
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 146..245
score: 7.29
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 246..346
score: 9.72
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..61
e-value: 6.6E-6
score: 27.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..59
NoneNo IPR availablePANTHERPTHR24099FAMILY NOT NAMEDcoord: 68..451
NoneNo IPR availablePANTHERPTHR24099:SF11FIBRONECTIN TYPE III DOMAIN-CONTAINING 3BA-RELATEDcoord: 68..451
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 8..59
score: 9.038
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 66..453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13012contigEcto-sp13_S_contig13012:3..4503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13012.2476.1mRNA_Ecto-sp13_S_contig13012.2476.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13012 3..4503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13012.2476.1 ID=prot_Ecto-sp13_S_contig13012.2476.1|Name=mRNA_Ecto-sp13_S_contig13012.2476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp
VDARGGVEDRSPLFLAALAKRWDACTWLLEVGASKIIRDKRGLTAYQAMA
ASSDPEVAERSGMLTDPPQRVVSVSCRGITHNTLDLTWSEPLRSYDEEVF
VGYLVEWRPMRSRPVCPAHSRHVAERVRPLRKGKKKRGRAGWQGAEIRPG
TAEEACTTSHQAFSTGGNRDARGAASASSLRRPNTGGGETTADEALPWKR
RGVEIFPLRLKHLYPATNYIVRVSARTLAGYGVPSREALLRTRVSPPSAP
KEAAHMVSATPNSITVGWVPPKYENGEPITRYEIQRLVLDRHHPDWDKGR
VLAKAGSSELLTTTTTTTTSDCSGSGNGNSNGDDESTNNVTATTSTDSIC
SASKTHTEATQAPAEAPACFGSRVESGSAEESGVKLPSVSGGGSGTGTMN
EDKKQIGVWIGRRTDKLSPHHTAGGLPTYCRALFRVRAGNLAGWGPWSPS
SDALEAQDIILPIKRGATQMLMRWFNKPDGDVLRWELSRRVFKYGTDFRG
DNDDSWILCSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR036116FN3_sf