prot_Ecto-sp13_S_contig12989.2451.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12989.2451.1
Unique Nameprot_Ecto-sp13_S_contig12989.2451.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12989.2451.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.190e-59
Identity = 112/130 (86.15%), Postives = 120/130 (92.31%), Query Frame = 0 
Query:    1 MLVEASIVANSTSYKVRALHIAVSLAVSTPASILIPKLFATAAAPPPSVTVTMLHAWEKIVPPTSQASLTAQDMTDTKANSQSRWLREPNTVVAIFRLITSAVLRSTSRVSPSFRGNRRYSTGGAVDRGT 130
            MLVEASIVANSTSYK+RA+HI VSLAVS PASIL PKLFA AAAPPPS+TVTMLHAWEKIVPPTSQ S TAQDMT  KANSQSRWLREPNTVVA+FRLI+SAVL+STSRVS SFR +RRYS+GGAVDRGT
Sbjct:  483 MLVEASIVANSTSYKIRAVHIVVSLAVSMPASILFPKLFAAAAAPPPSITVTMLHAWEKIVPPTSQGSTTAQDMTYAKANSQSRWLREPNTVVAVFRLISSAVLKSTSRVSSSFREDRRYSSGGAVDRGT 612
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BLAST of mRNA_Ecto-sp13_S_contig12989.2451.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.610e-48
Identity = 93/107 (86.92%), Postives = 100/107 (93.46%), Query Frame = 0 
Query:   24 SLAVSTPASILIPKLFATAAAPPPSVTVTMLHAWEKIVPPTSQASLTAQDMTDTKANSQSRWLREPNTVVAIFRLITSAVLRSTSRVSPSFRGNRRYSTGGAVDRGT 130
            SLAVS PASILIPKLFATAAAPPPSVTVTMLHAWEKIVP T+Q  LTAQDMT++KANSQ+RWLREPNTV+A+FRLI+SAVLRST RV PSFRG RRYSTGGAVDRGT
Sbjct: 1440 SLAVSMPASILIPKLFATAAAPPPSVTVTMLHAWEKIVPSTNQEVLTAQDMTNSKANSQTRWLREPNTVMAVFRLISSAVLRSTLRVPPSFRGGRRYSTGGAVDRGT 1546
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BLAST of mRNA_Ecto-sp13_S_contig12989.2451.1 vs. uniprot
Match: D7FLP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP9_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.710e-10
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:   93 VAIFRLITSAVLRSTSRVSPSFRGNRRYSTGGAVDRGT 130
            +A+FRLI+SAVLRST RV PSFRG RRYSTGGAVDRGT
Sbjct:    1 MAVFRLISSAVLRSTLRVPPSFRGGRRYSTGGAVDRGT 38
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12989.2451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE1.190e-5986.15GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4X3_ECTSI2.610e-4886.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLP9_ECTSI4.710e-1084.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12989contigEcto-sp13_S_contig12989:652..1920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12989.2451.1mRNA_Ecto-sp13_S_contig12989.2451.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12989 652..1920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12989.2451.1 ID=prot_Ecto-sp13_S_contig12989.2451.1|Name=mRNA_Ecto-sp13_S_contig12989.2451.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MLVEASIVANSTSYKVRALHIAVSLAVSTPASILIPKLFATAAAPPPSVT
VTMLHAWEKIVPPTSQASLTAQDMTDTKANSQSRWLREPNTVVAIFRLIT
SAVLRSTSRVSPSFRGNRRYSTGGAVDRGT*
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