prot_Ecto-sp13_S_contig12935.2413.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12935.2413.1
Unique Name	prot_Ecto-sp13_S_contig12935.2413.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	396

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 1.620e-107
Identity = 222/269 (82.53%), Postives = 228/269 (84.76%), Query Frame = 0

Query:  133 VRGADGRQTSPIHGVVLPAVPASKSDGIRSAAEAAVPSRPKSPVAAAG--HDEPPPEVTPGGRAGGRRFLSLPGGLASRSSGRTRDGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLERQDLESL 395
            VR ADGR+ SP HGV LPAVPA+KSDG+RSAA AAVP RP+SPVA      DEPPPEVTPGGRAG R+FLSLPGG ASRSS RT D   XXXXX                  XXXXXXXXXXXXXXXXXXXXXXXXXX    GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADD+LLNDQGLTCYEGLERQDLESL
Sbjct:  715 VRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVAXXXXXRDEPPPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQTGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 983

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7S2SVF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.010e-29
Identity = 62/110 (56.36%), Postives = 77/110 (70.00%), Query Frame = 0

Query:  277 EYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEG 386
            EY ++VFS+CRH RL EV+ AL +GF +   +DENGNTLL  AAQNGLR   K  L+  RG  +N++N RGNT LHY FA+G   L  YL  KGADD++LN  GL+ YEG
Sbjct:   26 EYRSQVFSFCRHKRLREVEAALDNGFPIDE-QDENGNTLLFVAAQNGLRQAAKLCLR--RGAHVNLQNLRGNTPLHYCFAYGHSGLAAYLIEKGADDSILNSDGLSVYEG 132

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.400e-25
Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 0

Query:  269 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDTLLNDQGLTCYEGLE 388
            G      E+ VA VFS  RH R  EV+  L  G  V   RD++GNT+L  A QNGL+ M K  L+ G    +N +N +GNT LHY F +G+   LG+Y+ SKGAD TL ND GLTC++GLE
Sbjct:   17 GGGPSLSEKEVADVFSLARHNRCKEVEALLDRGVPV-NLRDKHGNTILTIACQNGLKKMAKVALRAGAD--INTRNYKGNTPLHYCFTYGWGDTLGQYMLSKGADGTLRNDLGLTCFQGLE 134

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK)

HSP 1 Score: 106 bits (264), Expect = 3.060e-24
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 0

Query:  269 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDTLLNDQGLTCYEGLER 389
            GA    E + +  VFSY RH R+ +++  L +G  V   RD+ GNT+L  A QNG +   K+ L+  RG  +N +N RGNT LH+ F +G+ + LG+YL SKGAD T+ N+ G+TCYEG+ +
Sbjct:    6 GALSAAEAKDLEDVFSYARHNRVDDLERLLDAGMPV-NIRDQYGNTVLCVACQNGHKRAAKAALR--RGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGIRK 124

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7R9T857_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T857_MICPS)

HSP 1 Score: 104 bits (259), Expect = 1.380e-22
Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 0

Query:  277 EYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEG-------RGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLE 388
            E + + FS  RHGR+ ++ E   SG D    RD NG TLLH AAQN  R   K VL+         R   ++ +  +G+TALHY FA+G+Q LG YL S GADDT+ N  G+TCYEGL+
Sbjct:   20 EDLVEAFSKARHGRVKDLAELFKSGVDPAA-RDINGLTLLHMAAQNNQRKATKLVLKHTDFATNPPRLDLIDAQTKQGHTALHYCFAYGYQDLGNYLLSLGADDTITNVHGMTCYEGLD 137

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7S0Y9L9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y9L9_HEMAN)

HSP 1 Score: 102 bits (255), Expect = 8.110e-22
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 0

Query:  283 FSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGL 387
            FS  RHG+  E+   L +G  V   +D  GNTLL+ AAQNG + + K +L+  RG  LN +N++G T LH+ F +GF  LG YL +KGADDT+ N  GLTCYEGL
Sbjct:  122 FSKVRHGKRNEIISLLDAGCPVDL-KDPAGNTLLNVAAQNGHKSIIKMLLR--RGGALNTQNHKGQTPLHFCFTYGFTDLGNYLVTKGADDTVQNFAGLTCYEGL 223

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A2D4BHZ8_PYTIN (Proteasome subunit alpha, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ8_PYTIN)

HSP 1 Score: 105 bits (263), Expect = 1.680e-21
Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 0

Query:  282 VFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDTLLNDQGLTCYEGLE 388
            VFS  RH R+  V   L  G  V   RD +GNT+L  A QNGL+ M K  L+  RG  +N +NNRGNTALH+ FA+G+   LG+YL SKGAD T+ ND GL C++G++
Sbjct:  319 VFSAARHNRVDSVAYMLDQGVSV-NARDAHGNTILSIACQNGLKRMAKLALR--RGANINSQNNRGNTALHFCFAYGYGDTLGEYLLSKGADATIANDAGLLCFDGID 423

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A024TBW2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBW2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.900e-21
Identity = 56/108 (51.85%), Postives = 70/108 (64.81%), Query Frame = 0

Query:  282 VFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDTLLNDQGLTCYEGLE 388
            VFS  RH R+ +V+  L +G  V    DENGNTLL  A QNGL+ + K +L+  RG  +N  N R NT LH+ FA+G+ + LG YL SKGAD TL ND GL CY G+E
Sbjct:  115 VFSLVRHNRVDDVKTVLDNGLPVDI-TDENGNTLLIIACQNGLKRLTKELLR--RGANINACNKRRNTPLHFCFAYGYGETLGAYLISKGADVTLTNDDGLECYYGIE 219

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: F0XVE9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE9_AURAN)

HSP 1 Score: 97.8 bits (242), Expect = 2.010e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 0

Query:  308 RDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLERQDLESL 395
            +DE GNTLL  A QNG + + K  L+  RG  +N+ NN G T LHYA+A+GF+ + +YL SKGADD   N  GLTCYEGL  Q++E++
Sbjct:   13 QDELGNTLLSVAVQNGNKRIAKLTLR--RGANINLPNNNGQTVLHYAYAYGFEDIAEYLKSKGADDRPKNSDGLTCYEGLSMQEIEAI 98

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BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Match: A0A7S4KK07_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KK07_GUITH)

HSP 1 Score: 102 bits (253), Expect = 2.020e-21
Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 0

Query:  269 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLER 389
            G+ V+   E  A  F  CRHGR  E+ + L     V   R+E GNTLL  AAQN  + MCK +LQ  R   LN +N  G TALH++FAFG+ +LGK+L  KGA   + N +G+TCYEGL +
Sbjct:  107 GSKVKLTAEEQA-AFQACRHGREDELYKLLEENVHV-NVRNEAGNTLLMVAAQNNQKKMCK-ILQN-RAADLNAQNRMGQTALHFSFAFGYMELGKWLVKKGASTNIKNIEGMTCYEGLSK 223

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12935.2413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKE1_ECTSI	1.620e-107	82.53	Similar to retinitis pigmentosa GTPase regulator n...	[more]
A0A7S2SVF6_9STRA	1.010e-29	56.36	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S1C915_9STRA	2.400e-25	48.76	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A7S3XZ48_HETAK	3.060e-24	44.26	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7R9T857_MICPS	1.380e-22	47.06	Hypothetical protein (Fragment) n=1 Tax=Micromonas...	[more]
A0A7S0Y9L9_HEMAN	8.110e-22	50.48	Hypothetical protein n=2 Tax=Hemiselmis andersenii...	[more]
A0A2D4BHZ8_PYTIN	1.680e-21	50.93	Proteasome subunit alpha, putative n=1 Tax=Pythium...	[more]
A0A024TBW2_9STRA	1.900e-21	51.85	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
F0XVE9_AURAN	2.010e-21	52.27	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S4KK07_GUITH	2.020e-21	47.11	Hypothetical protein (Fragment) n=1 Tax=Guillardia...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 346..375 e-value: 27.0 score: 13.7 coord: 311..342 e-value: 1.1 score: 18.3
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 346..378 score: 10.045
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 255..395 e-value: 7.1E-20 score: 73.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 284..384
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 294..374 e-value: 1.8E-9 score: 38.1
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 311..382 score: 14.663
None	No IPR available	PANTHER	PTHR24119:SF3		coord: 276..387
None	No IPR available	PANTHER	PTHR24119	FAMILY NOT NAMED	coord: 276..387

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12935	contig	Ecto-sp13_S_contig12935:2240..4258 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12935.2413.1	mRNA_Ecto-sp13_S_contig12935.2413.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12935 105..4783 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12935.2413.1 ID=prot_Ecto-sp13_S_contig12935.2413.1|Name=mRNA_Ecto-sp13_S_contig12935.2413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=396bp
MQQQGRRASTGGGGAGERVDAARVRGRANSVPVPGGAAATAVAAAAAAAA
AAAAAATAAAAAAAAGVVIPPLPEGVQEEALLPPQKVSRRRRTGSSLSPP
GGGGVDGGGKVVSKGTSSSSNGRALNGGGGVVVRGADGRQTSPIHGVVLP
AVPASKSDGIRSAAEAAVPSRPKSPVAAAGHDEPPPEVTPGGRAGGRRFL
SLPGGLASRSSGRTRDGGGGRRRDESAGRRRGGVEGQVGGEKTAAAGGTG
GSGRGSSGRQGQGAAGRGGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGS
GFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTA
LHYAFAFGFQQLGKYLASKGADDTLLNDQGLTCYEGLERQDLESL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom