prot_Ecto-sp13_S_contig12926.2406.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12926.2406.1
Unique Nameprot_Ecto-sp13_S_contig12926.2406.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12926.2406.1 vs. uniprot
Match: A0A6H5K735_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K735_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 1.820e-138
Identity = 201/217 (92.63%), Postives = 205/217 (94.47%), Query Frame = 0 
Query:    1 VATECTTVIISSAGDESRSMPVDLSGMYYDVGMTLENRPVFFSSNDTATSESVMYWTGGVSIAIEGGPDFGRQRHLTNNAQPTGDGVDNDGDTLVLSGRGHGESVVAREEEGRALAACDSGGWILRESDGGYPAYMVFDCANHPVDISSGVWYRIPSRGDSAETMDASFAVVCLDPENNGGPSPASSDMTNSPAVEIVGFATVSPGATVEVEDVFDR 217
            +ATECTTV+ISSAGDESRSMPVDLSGMYYDVGMTLENRPVFFS+NDTATSESVMYWTGGVSIA+EG PDF RQRHLTN AQP GDGV NDGDTL LSGRGH  SVVAREE GRALAACDSGGWILRESDGGYPAYMVFDCA HPVDISSGVWYRIPSRGDSAETMDASFAVVCLDPE NGGPSPASSDMTNSPAVEIVGF TVSPGATVEVEDVFDR
Sbjct:   13 LATECTTVVISSAGDESRSMPVDLSGMYYDVGMTLENRPVFFSTNDTATSESVMYWTGGVSIAVEGEPDFSRQRHLTNYAQPRGDGVVNDGDTLALSGRGHRGSVVAREE-GRALAACDSGGWILRESDGGYPAYMVFDCAYHPVDISSGVWYRIPSRGDSAETMDASFAVVCLDPEGNGGPSPASSDMTNSPAVEIVGFPTVSPGATVEVEDVFDR 228
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12926.2406.1 vs. uniprot
Match: D7FXK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK4_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 5.310e-135
Identity = 195/217 (89.86%), Postives = 203/217 (93.55%), Query Frame = 0 
Query:    1 VATECTTVIISSAGDESRSMPVDLSGMYYDVGMTLENRPVFFSSNDTATSESVMYWTGGVSIAIEGGPDFGRQRHLTNNAQPTGDGVDNDGDTLVLSGRGHGESVVAREEEGRALAACDSGGWILRESDGGYPAYMVFDCANHPVDISSGVWYRIPSRGDSAETMDASFAVVCLDPENNGGPSPASSDMTNSPAVEIVGFATVSPGATVEVEDVFDR 217
            +ATECTTV+ISSAGDESRSMPVDLSGMYYDVGMTL+NRPVFFS+NDTATSESVMYWTGGVSIAIEG PDFGRQRHLTNNAQP GD   NDGD L LS RG G SV AREEEGRALAACDSGGWILRESDGGYPAYMVFDCA+HPVDISSGVWY+IPSRGDSAETMDASFA VCL+ ENN GPSPASS+MTNSPAVEIVGFATVSPGATVEVEDVFDR
Sbjct:   13 LATECTTVVISSAGDESRSMPVDLSGMYYDVGMTLDNRPVFFSTNDTATSESVMYWTGGVSIAIEGEPDFGRQRHLTNNAQPRGD---NDGDALALSARGRGGSVAAREEEGRALAACDSGGWILRESDGGYPAYMVFDCASHPVDISSGVWYKIPSRGDSAETMDASFAAVCLNSENNDGPSPASSEMTNSPAVEIVGFATVSPGATVEVEDVFDR 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12926.2406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K735_9PHAE1.820e-13892.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXK4_ECTSI5.310e-13589.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12926contigEcto-sp13_S_contig12926:1..3823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12926.2406.1mRNA_Ecto-sp13_S_contig12926.2406.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12926 1..3823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12926.2406.1 ID=prot_Ecto-sp13_S_contig12926.2406.1|Name=mRNA_Ecto-sp13_S_contig12926.2406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
VATECTTVIISSAGDESRSMPVDLSGMYYDVGMTLENRPVFFSSNDTATS
ESVMYWTGGVSIAIEGGPDFGRQRHLTNNAQPTGDGVDNDGDTLVLSGRG
HGESVVAREEEGRALAACDSGGWILRESDGGYPAYMVFDCANHPVDISSG
VWYRIPSRGDSAETMDASFAVVCLDPENNGGPSPASSDMTNSPAVEIVGF
ATVSPGATVEVEDVFDR
back to top