prot_Ecto-sp13_S_contig1289.2378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1289.2378.1
Unique Nameprot_Ecto-sp13_S_contig1289.2378.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1289.2378.1 vs. uniprot
Match: D8LQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ22_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 2.320e-66
Identity = 105/110 (95.45%), Postives = 105/110 (95.45%), Query Frame = 0 
Query:    1 AWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWFGLSPDPVRPLPGSLGDDTLRPHTAPERLTDAAGQWSPQRWAGGYANREYDRRASR 110
            AWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAW GLSPDPVRPLPGS GD TLRPHTAPERLTDAAGQWSPQ WAGG ANREYDRRASR
Sbjct:  370 AWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASR 479
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1289.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ22_ECTSI2.320e-6695.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1289contigEcto-sp13_S_contig1289:14357..15934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1289.2378.1mRNA_Ecto-sp13_S_contig1289.2378.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1289 14355..15934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1289.2378.1 ID=prot_Ecto-sp13_S_contig1289.2378.1|Name=mRNA_Ecto-sp13_S_contig1289.2378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
AWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLP
QIAWFGLSPDPVRPLPGSLGDDTLRPHTAPERLTDAAGQWSPQRWAGGYA
NREYDRRASR
back to top