prot_Ecto-sp13_S_contig12830.2336.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12830.2336.1
Unique Nameprot_Ecto-sp13_S_contig12830.2336.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: D8LTE8_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE8_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.520e-43
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
Query:    2 ADVVVEFTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIKA 73
            A+VVVEFT SKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIKA
Sbjct:    2 ANVVVEFTNSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIKA 73          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A835Z7N4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7N4_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 6.150e-16
Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    4 VVVEFTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRV-PASRRIVKIK 72
            + V FT S K + A  G+ LSQ+ AK G+KV+Y+CK G CATC +N+DGR  KAC  ++ P +RR+VKIK
Sbjct:   48 IEVHFTVSDKKITAEGGTLLSQVAAKAGVKVRYNCKAGTCATCVLNVDGRMQKACVTKLDPFTRRVVKIK 117          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S3PX20_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX20_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.930e-13
Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    8 FTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIK 72
              +  K +N   GSPL   CAK G+K KYSCK+GDC +C++++ G  +KAC G+VP   R+  ++
Sbjct:   40 LARGAKKMNFKPGSPLKNACAKLGVKPKYSCKKGDCGSCTVSVGGSRMKACVGKVPPEPRLKSLQ 104          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S2SLY0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SLY0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.080e-13
Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    5 VVEFTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIKA 73
            + + T + K +    GSP+   CAK G+K +YSCK+GDCA+C+I++ G  +K C G+VP + R+  ++A
Sbjct:   40 MTKLTYNGKAIEFKEGSPMKSACAKLGMKPRYSCKKGDCASCTISVGGTRIKPCVGKVPPAPRLKSLQA 108          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S0B0B1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0B1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.010e-12
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
Query:   13 KTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKI 71
            K VNAVVG  +SQ+ A   +K+ YSCK GDC TC + I+GRN KACQ  VP  +  + +
Sbjct:   94 KPVNAVVGQKISQVAASARVKIPYSCKNGDCGTCVVKINGRNQKACQATVPNGKCQISV 152          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S2USA5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USA5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.280e-12
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 QADVVVEFTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKI 71
            + DV V F + KK V A  G P+ ++  + G K+KYSC++G+CA CS+ +DG   K C   VP  ++ V+I
Sbjct:   85 KGDVEVNFVRQKKIVKASAGEPMREVAKRAGAKIKYSCEKGNCAVCSVWMDGCERKVCVATVPKGQKKVEI 155          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A6S8XS20_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XS20_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.070e-11
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   13 KTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIK 72
            K V+   GSPL    AK G+K KYSCK+GDC +C++++ G  +KAC G+VP + R+  ++
Sbjct:   53 KKVDFKEGSPLKNAAAKLGVKPKYSCKRGDCGSCTLSVGGTRIKACVGKVPPAPRLKSLQ 112          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S2D671_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D671_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.090e-11
Identity = 25/64 (39.06%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    8 FTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKI 71
             +   K ++   GS +   C K GIKV  +CK+GDC TC++N+ G+N+KAC G+VP + ++  +
Sbjct:   60 LSNGAKKISVPEGSSMMAACKKLGIKVPTNCKKGDCGTCTVNVGGKNIKACVGKVPPAPKLKSV 123          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7S2HVR3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HVR3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.020e-11
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   13 KTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIK 72
            K +    GSPL    AK G+K KYSC++GDC +C++++ G  VKAC G+VP + R+  ++
Sbjct:   50 KKIEFKEGSPLKNAAAKLGVKPKYSCRKGDCGSCTLSVGGTRVKACVGKVPPAPRLKSLQ 109          
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Match: A0A7R9WSN6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSN6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.830e-11
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    8 FTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINIDGRNVKACQGRVPASRRIVKIK 72
             T   K  N   GSPL    A  G+K KYSC++GDC +C++++ G+ +KAC G+VP   R+  ++
Sbjct:   46 LTNGNKKKNFKPGSPLKSAVAALGVKPKYSCRKGDCGSCTVSVGGQRIKACIGKVPDEPRLKSLQ 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12830.2336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LTE8_ECTSI5.520e-4397.222Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835Z7N4_9STRA6.150e-1652.862Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3PX20_9STRA1.930e-1343.08Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2SLY0_9STRA2.080e-1340.58Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0B0B1_9STRA1.010e-1250.85Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2USA5_9STRA6.280e-1240.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S8XS20_9STRA1.070e-1145.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2D671_9STRA2.090e-1139.06Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2HVR3_9STRA4.020e-1143.33Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9WSN6_9STRA5.830e-1140.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 1..70
e-value: 2.1E-8
score: 35.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 12..56
e-value: 1.1E-7
score: 31.7
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 2..73
score: 9.273
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 38..46
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 4..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12830contigEcto-sp13_S_contig12830:3759..4576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12830.2336.1mRNA_Ecto-sp13_S_contig12830.2336.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12830 3759..4576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12830.2336.1 ID=prot_Ecto-sp13_S_contig12830.2336.1|Name=mRNA_Ecto-sp13_S_contig12830.2336.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
QADVVVEFTKSKKTVNAVVGSPLSQLCAKNGIKVKYSCKQGDCATCSINI
DGRNVKACQGRVPASRRIVKIKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf