prot_Ecto-sp13_S_contig1279.2305.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1279.2305.1
Unique Nameprot_Ecto-sp13_S_contig1279.2305.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length407
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1279.2305.1 vs. uniprot
Match: D7FTX7_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX7_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 7.510e-201
Identity = 344/406 (84.73%), Postives = 350/406 (86.21%), Query Frame = 0 
Query:    1 MGAALGGSCGGSTKEVAGSQCDGPPPGEEPPELDAWIDHSTRPGLRSIVTKSYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLQARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSSRVVPEPPSLKWQASMEGPVLVPSVSLVKRATLDARDHSGSYPIHLAAACGHADVVQVLLQHGADVSGYNGVAQSPLHTAAAGLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGNAMVVSILVDGGAELEARGNISNXXXXXXXXASLHSESVQRLLQHGADERAVDIDELTPENMVCESMTEEQKAADPTIVPVGEAICRMLADAPQDRLWRRRRLLPLLQWRQPPPAFDTEPGTAATVGAGSSQSIFELVVCEEEGIMRNIVSYL 406
            MGAALGGSCGG TKEVAGS+CDGPPPGE+PPELDAWIDHST PGLRSIVT++YQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPL ARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSS +VPEPPSLKWQASMEGPVLVPSVSLVKR TLDARDHSGS PIHLAAACGHADVVQVLLQHGADVSG NGVAQSPLHTAAAGLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          XXXXXXXX               ADERAVDID+LTPENMVCE MTEEQKAADPTI PVGE ICRMLADAPQDRLWRRRRLLPLL WRQPPPAFDT PGTA TV AGS QSIFELVVCEEEGIMRNIVSYL
Sbjct:    1 MGAALGGSCGGRTKEVAGSECDGPPPGEQPPELDAWIDHSTWPGLRSIVTEAYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLHARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSSGMVPEPPSLKWQASMEGPVLVPSVSLVKRTTLDARDHSGSCPIHLAAACGHADVVQVLLQHGADVSGSNGVAQSPLHTAAAGLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADERAVDIDDLTPENMVCERMTEEQKAADPTIAPVGETICRMLADAPQDRLWRRRRLLPLLHWRQPPPAFDTGPGTAVTVDAGSGQSIFELVVCEEEGIMRNIVSYL 406
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BLAST of mRNA_Ecto-sp13_S_contig1279.2305.1 vs. uniprot
Match: A0A4S3GJR2_9ACTN (Ankyrin repeat domain-containing protein n=5 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A4S3GJR2_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 4.420e-6
Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 0 
Query:   72 AASDGNLAGVRQLLAAGAPLQARDLEGHTPLHRASVAGHAGVAEQLLSSG---DGRAPPLGGASPSSSRVVPEPPSLKWQASMEGPVLVPSVSLVKRATLDA-RDHSGSYPIHLAAACGHADVVQVLLQHGADVSGYNGVAQSPL 212
            AA D   A V +LLA+G  + A D EG + L  A   GHA V   LL++G   +GRA P    +P +            +A+M G   V    +    +  A R  S   P+ LAA CGH DVV++LL  GAD+   +   +SPL
Sbjct:   14 AAKDNRPAEVARLLASGVGVDAIDREGRSALDLAVQEGHADVVRLLLAAGADPEGRAGPYHELTPMT------------EAAMFGRAAVVEALIDAGVSTGAQRVRSPHVPLVLAATCGHPDVVELLLDRGADIEDRDFKGRSPL 146
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BLAST of mRNA_Ecto-sp13_S_contig1279.2305.1 vs. uniprot
Match: A0A835WT76_9CHLO (HET domain-containing protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WT76_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 7.760e-6
Identity = 48/125 (38.40%), Postives = 63/125 (50.40%), Query Frame = 0 
Query:   72 AASDGNLAGVRQLLAAGAPLQARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSSRVVPEPPSLKWQASMEGPVLVPSVSLVKRATLDARDHSGSYPIHLAAACGHADVVQVLLQ 196
            A +D   A V++LLAAGA ++A D  G TPL  A VAGHA     LL          GGAS  +     E  S    A+  G   V  + +   A   ARD +G  P+ +AA  GH +VVQ+LL+
Sbjct:  576 AVADNKAAEVKELLAAGAFVEALDAAGRTPLLMAVVAGHADTVRVLLD---------GGASRQACMSEEEKDSALHVAAARGDARVAELLVEGGADTAARDAAGCTPLTVAAREGHLEVVQLLLR 691
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BLAST of mRNA_Ecto-sp13_S_contig1279.2305.1 vs. uniprot
Match: A0A4Q6FH02_9GAMM (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A4Q6FH02_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 3.600e-5
Identity = 58/191 (30.37%), Postives = 83/191 (43.46%), Query Frame = 0 
Query:   45 LRSIVTKSYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLQARDLEGHTPLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPS--------------------SSRVVPE---PPSLKWQASMEGPVLVPSVSLVKRATLDARDHSGSYPIHLAAACGHADVVQVLLQHGADVSGYNGVAQSPL 212
            LR+++ +   +++ + W   L A   D+   G    V  LLA GA  +A D EG+TPLH A+ +   GVA  L  +G      L G   S                     ++  PE   P  L    + E       + L  +A +DARD  G   +H AA  GHA +V VLL  GAD    +G  ++PL
Sbjct:  288 LRALIERGVDLNAAQAWMTPLLAATRDS-WHGRPEAVMTLLANGADPRATDTEGNTPLHHAARSSDPGVAALLRDAG-AEMDALNGEGVSXLGTACIAGNWRLARFLLERGAKPEPEGGQPVLLAAAGTEEDDAAGVQLLLRHKARVDARDARGRSALHEAALAGHAGIVAVLLDAGADPHARDGDGRTPL 476
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1279.2305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTX7_ECTSI7.510e-20184.73Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX7... [more]
A0A4S3GJR2_9ACTN4.420e-635.86Ankyrin repeat domain-containing protein n=5 Tax=u... [more]
A0A835WT76_9CHLO7.760e-638.40HET domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A4Q6FH02_9GAMM3.600e-530.37Ankyrin repeat domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 98..113
score: 40.46
coord: 190..204
score: 38.45
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 207..237
e-value: 13.0
score: 14.7
coord: 97..128
e-value: 1.1
score: 18.2
coord: 241..270
e-value: 0.001
score: 28.3
coord: 174..203
e-value: 1.9E-4
score: 30.8
coord: 275..304
e-value: 0.06
score: 22.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 174..206
score: 13.758
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 275..307
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 207..240
score: 10.446
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 241..273
score: 13.651
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 97..121
score: 10.179
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 47..135
e-value: 8.9E-12
score: 46.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 228..334
e-value: 5.1E-25
score: 89.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 147..227
e-value: 3.9E-16
score: 60.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 69..316
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 179..270
e-value: 1.2E-15
score: 57.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 69..312
score: 51.621
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 169..321
coord: 69..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1279contigEcto-sp13_S_contig1279:4170..5642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1279.2305.1mRNA_Ecto-sp13_S_contig1279.2305.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1279 4170..7821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1279.2305.1 ID=prot_Ecto-sp13_S_contig1279.2305.1|Name=mRNA_Ecto-sp13_S_contig1279.2305.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp
MGAALGGSCGGSTKEVAGSQCDGPPPGEEPPELDAWIDHSTRPGLRSIVT
KSYQISSRERWSKFLGAGLLDAASDGNLAGVRQLLAAGAPLQARDLEGHT
PLHRASVAGHAGVAEQLLSSGDGRAPPLGGASPSSSRVVPEPPSLKWQAS
MEGPVLVPSVSLVKRATLDARDHSGSYPIHLAAACGHADVVQVLLQHGAD
VSGYNGVAQSPLHTAAAGLDSGDCVRLLLDAGGDLKARDSAGRTPLHVAA
SAGNAMVVSILVDGGAELEARGNISNRTPLHEACASLHSESVQRLLQHGA
DERAVDIDELTPENMVCESMTEEQKAADPTIVPVGEAICRMLADAPQDRL
WRRRRLLPLLQWRQPPPAFDTEPGTAATVGAGSSQSIFELVVCEEEGIMR
NIVSYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom