prot_Ecto-sp13_S_contig1275.2279.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1275.2279.1
Unique Nameprot_Ecto-sp13_S_contig1275.2279.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length344
Homology
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Match: A0A6H5KWJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWJ3_9PHAE)

HSP 1 Score: 518 bits (1334), Expect = 3.800e-183
Identity = 284/322 (88.20%), Postives = 289/322 (89.75%), Query Frame = 0
Query:   25 YVAVTNRCSTTSLIASRGPGLLMPPSFHPLPEDVEPSPVEILQDVTERLSGGGGGSGE---AGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHASLLRPRSAENSKVDGSCADAAPTGGAATTRPSQDDVMPIRLVTNGLWPVVVVGEQVVAPPSPEADTSEDNGEAKSKVDRQGRRRTGEGGGAGGGDFKVRAAPGTSGGIADRSGSAERGAVASPCAASVARQIAEVFDSVSVALNTADPAQYQVLMKPSLDGLLEEGAGPGPGAHGYVCDLVKECVSRGVATECTVVDRNGVDLRRARDLAEAMGASCRVRPYVPR 343
            YVAVTNRCSTTSLIASRGPGLLMPPSFHPLP DVEPSPVEILQDVTERLSG GGGSGE   AGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHA+LLRPRSAENSKVDGS ADA PTGGAATTRPSQD VMPIRLVTNGLWPVV V EQVV PPSPEADTS   GEAKS VDRQGRRR G         FKVRAA GTSGGIADRSGSAERGAVASP AASVA+QIAEVFDSVSVALNTADPAQYQ LMKPSLDGL+EEGAGP   AHGYVCDLVKEC SRGVATECTVV R+GVDLRRAR+LAEAMGASCRVRPYVPR
Sbjct:   13 YVAVTNRCSTTSLIASRGPGLLMPPSFHPLPADVEPSPVEILQDVTERLSGSGGGSGESLRAGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHANLLRPRSAENSKVDGSGADATPTGGAATTRPSQDVVMPIRLVTNGLWPVVAVDEQVVGPPSPEADTSGYTGEAKSNVDRQGRRRVGXXXXXXXXXFKVRAASGTSGGIADRSGSAERGAVASPSAASVAKQIAEVFDSVSVALNTADPAQYQELMKPSLDGLVEEGAGPV--AHGYVCDLVKECASRGVATECTVVHRHGVDLRRARELAEAMGASCRVRPYVPR 332          
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Match: D8LHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH4_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 8.350e-150
Identity = 233/261 (89.27%), Postives = 236/261 (90.42%), Query Frame = 0
Query:   83 AGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHASLLRPRSAENSKVDGSCADAAPTGGAATTRPSQDDVMPIRLVTNGLWPVVVVGEQVVAPPSPEADTSEDNGEAKSKVDRQGRRRTGEGGGAGGGDFKVRAAPGTSGGIADRSGSAERGAVASPCAASVARQIAEVFDSVSVALNTADPAQYQVLMKPSLDGLLEEGAGPGPGAHGYVCDLVKECVSRGVATECTVVDRNGVDLRRARDLAEAMGASCRVRPYVPR 343
            AGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHA+LLRPRSAENSKVDGS ADA PTGGAA TRPSQDD MPIRLVTNGLWPVV V EQVV PPSPEADTS D GEAKS VDRQGRRR G  GG GGGDFKVRAA GTSGGIADRSGSAERGAVASP AASVARQIAEVFDSVSVALNTADP QYQ LM PS DGLLEE  G GPGAH YVCDLVKEC SRGVATECTVVDR+GVDLRRAR+LAEAMGASCRVRPYVPR
Sbjct:    6 AGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHANLLRPRSAENSKVDGSSADATPTGGAAATRPSQDDAMPIRLVTNGLWPVVAVDEQVVGPPSPEADTSRDIGEAKSNVDRQGRRRMGGSGGVGGGDFKVRAASGTSGGIADRSGSAERGAVASPSAASVARQIAEVFDSVSVALNTADPEQYQELMNPSPDGLLEEEGG-GPGAHSYVCDLVKECASRGVATECTVVDRHGVDLRRARELAEAMGASCRVRPYVPR 265          
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Match: A0A835YXM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.860e-13
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   25 YVAVTNRCSTTSLIASRGPGLLMPPSFHPLPEDVEPSPVEILQDVTERLSG---------------GGGGSGEAGGGLFDELVFAGVGEPLLRWPVVRDVVMSLRSRHASL 120
            YV+VTN  +T +L ASRGPG  MP  F PLP+D EPS  E+L+ +T+ LS                    +     G + E+VFAG+GEP LRW VVR    +LR  H  L
Sbjct:   15 YVSVTNLSNTITLPASRGPGFKMPAVFKPLPDDFEPSATEVLESLTKELSRQPTSLSCPRFFTNTQSNSPTFSLPAGAYQEIVFAGLGEPTLRWGVVRHAAEALRRSHPHL 125          
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Match: A0A4D9DFL6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFL6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.790e-9
Identity = 43/122 (35.25%), Postives = 59/122 (48.36%), Query Frame = 0
Query:  245 SVARQIAEVFDSVSVALNTADPAQYQVLMKPSLD-------------GLLEEGAGPGPGAH-----------GYVCDLVKECVSRGVATECTVVDRNGVDLRRARDLAEAMGASCRVRPYVP 342
            S+ R +AE F+SV+VA+NTAD +QY  LM+P L                 ++G                   G V   VKECV  G+ T+ T V R  VD+   R +A+ +GA+ R RPY P
Sbjct:  201 SIVRDVAEAFESVTVAVNTADASQYDSLMRPDLSMCGDAEAMQPYTFSCTDQGGTEXXXXXXXXXXXXXETLGEVLAFVKECVGSGIDTQITAVARPDVDVEAVRSMAKGVGATFRERPYFP 322          
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Match: A0A8J2SM46_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM46_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.240e-6
Identity = 40/103 (38.83%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   25 YVAVTNRCSTTSLIASRGPGLLMPPSFHPLPEDVEPSPVEILQDVT------ERLSGGG---GGSGEAGGGLFDE-LVFAGVGEPLLRWPVVRDVVMSLRSRH 117
            YV +TNR    SL+ASRGP   MP S    P + EP+   ++  V       ER    G   G +  A GG  D  + FAG+G+PLLRWP V ++   +R  H
Sbjct:   20 YVQLTNRARGLSLVASRGPAFQMPASSGFAPLEAEPTVDAVVAAVLDAYANDERKKALGQDVGRTRRADGGATDPGVAFAGLGDPLLRWPDVAEITRRVREHH 122          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1275.2279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KWJ3_9PHAE3.800e-18388.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH4_ECTSI8.350e-15089.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXM5_9STRA2.860e-1342.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DFL6_9STRA1.790e-935.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J2SM46_9STRA2.240e-638.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1275contigEcto-sp13_S_contig1275:3355..6957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1275.2279.1mRNA_Ecto-sp13_S_contig1275.2279.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1275 3352..7633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1275.2279.1 ID=prot_Ecto-sp13_S_contig1275.2279.1|Name=mRNA_Ecto-sp13_S_contig1275.2279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
MCMCCHCVYERHARDHLHHTLVARYVAVTNRCSTTSLIASRGPGLLMPPS
FHPLPEDVEPSPVEILQDVTERLSGGGGGSGEAGGGLFDELVFAGVGEPL
LRWPVVRDVVMSLRSRHASLLRPRSAENSKVDGSCADAAPTGGAATTRPS
QDDVMPIRLVTNGLWPVVVVGEQVVAPPSPEADTSEDNGEAKSKVDRQGR
RRTGEGGGAGGGDFKVRAAPGTSGGIADRSGSAERGAVASPCAASVARQI
AEVFDSVSVALNTADPAQYQVLMKPSLDGLLEEGAGPGPGAHGYVCDLVK
ECVSRGVATECTVVDRNGVDLRRARDLAEAMGASCRVRPYVPR*
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