prot_Ecto-sp13_S_contig12703.2238.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12703.2238.1
Unique Nameprot_Ecto-sp13_S_contig12703.2238.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12703.2238.1 vs. uniprot
Match: A0A6H5L5T7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5T7_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 6.530e-91
Identity = 150/174 (86.21%), Postives = 158/174 (90.80%), Query Frame = 0 
Query:    1 MIRRFWRSSGLPLDHIFATAAGVYRRSRLRSALLSWHSVAKAETHRINHRIEAAEVIQRATRVF-ARRTAERRRRVRAPAVLAASRIIQAEFRSWKARTKTADVAVRQKKAQELRERYWRDETAKDEQRRRYASIVIQAAWRGVAGREIGLSRARQKLRGVLNELGGGRGRMHR 173
            MIRRFWRSSGLPLDHIFATAAGVYRRSRLR+AL +WHSVAKAETH IN+RIEAAEVIQRATRVF AR TAERRRRVR PAVLAASR+IQAEFRS KAR KTADVAVRQ+  QELR+RYW DETAKDEQRRR AS VIQAAWRG AGR  GL+RAR+ LRGVLNELGGGRGRMHR
Sbjct:   30 MIRRFWRSSGLPLDHIFATAAGVYRRSRLRTALSTWHSVAKAETHHINYRIEAAEVIQRATRVFIARHTAERRRRVRGPAVLAASRMIQAEFRSRKARVKTADVAVRQQNRQELRKRYWCDETAKDEQRRRDASTVIQAAWRGAAGRAAGLNRARRTLRGVLNELGGGRGRMHR 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12703.2238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5T7_9PHAE6.530e-9186.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12703contigEcto-sp13_S_contig12703:3669..4492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12703.2238.1mRNA_Ecto-sp13_S_contig12703.2238.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12703 3669..4492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12703.2238.1 ID=prot_Ecto-sp13_S_contig12703.2238.1|Name=mRNA_Ecto-sp13_S_contig12703.2238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
MIRRFWRSSGLPLDHIFATAAGVYRRSRLRSALLSWHSVAKAETHRINHR
IEAAEVIQRATRVFARRTAERRRRVRAPAVLAASRIIQAEFRSWKARTKT
ADVAVRQKKAQELRERYWRDETAKDEQRRRYASIVIQAAWRGVAGREIGL
SRARQKLRGVLNELGGGRGRMHR*
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