prot_Ecto-sp13_S_contig1270.2233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1270.2233.1
Unique Nameprot_Ecto-sp13_S_contig1270.2233.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1270.2233.1 vs. uniprot
Match: D8LHX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX9_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.370e-36
Identity = 71/83 (85.54%), Postives = 71/83 (85.54%), Query Frame = 0 
Query:    1 MNDRLFDFRDRLCFYSNLGYVEALNEWQYEIRKICVKAEGFVHHQQRRDPHPRXXXXXXXXYSSEDKHSSSGKQPTLVEVRSK 83
            MNDRLFDFRDRLCFYSNLGYVEALNEWQYEIRKICVKAEGFVHHQQRRDP PR XXXXXXX         S KQPTLVEVRSK
Sbjct:    1 MNDRLFDFRDRLCFYSNLGYVEALNEWQYEIRKICVKAEGFVHHQQRRDPQPRHXXXXXXXXXXXXXXXXS-KQPTLVEVRSK 82
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BLAST of mRNA_Ecto-sp13_S_contig1270.2233.1 vs. uniprot
Match: A0A6H5L6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T9_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 8.310e-16
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:    1 MNDRLFDFRDRLCFYSNLGYVEALNEWQYEIRK 33
            MN+RLFDFRDRLCFYSNLGYVEALNEWQYEIRK
Sbjct:   69 MNNRLFDFRDRLCFYSNLGYVEALNEWQYEIRK 101
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1270.2233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHX9_ECTSI1.370e-3685.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6T9_9PHAE8.310e-1696.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1270contigEcto-sp13_S_contig1270:567..1301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1270.2233.1mRNA_Ecto-sp13_S_contig1270.2233.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1270 94..1341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1270.2233.1 ID=prot_Ecto-sp13_S_contig1270.2233.1|Name=mRNA_Ecto-sp13_S_contig1270.2233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MNDRLFDFRDRLCFYSNLGYVEALNEWQYEIRKICVKAEGFVHHQQRRDP
HPRHRHRHRHHYSSEDKHSSSGKQPTLVEVRSK*
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