prot_Ecto-sp13_S_contig12679.2215.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12679.2215.1
Unique Nameprot_Ecto-sp13_S_contig12679.2215.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12679.2215.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.180e-33
Identity = 74/97 (76.29%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:    1 MARGGGGAPRAVPATLGAMMDLASKDPAEFTRIIEENPRLLEQLERKAASTXXXXXXXVRLXXXXXXXXXAGAAEDPRRALDPRRADPRRDPRRQRK 97
            MAR GGGAPR +PATLGAMMDLASKDPAEFTRIIEENPRLLEQLERKAAST       VRL          G + DPRRALDPRRADPRRDPRRQRK
Sbjct: 2324 MARVGGGAPRVLPATLGAMMDLASKDPAEFTRIIEENPRLLEQLERKAASTTTSGSSGVRLPPSSRQGGTGGPSGDPRRALDPRRADPRRDPRRQRK 2420
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BLAST of mRNA_Ecto-sp13_S_contig12679.2215.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.130e-10
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0 
Query:    1 MARGGGGAPRAVPATLGAMMDLASKDPAEFTRIIEENPR 39
            MARGGGGAPR +PATLGAMMDLASKDPAEFTR + +N R
Sbjct: 2199 MARGGGGAPRVLPATLGAMMDLASKDPAEFTREMNDNKR 2237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12679.2215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNJ9_9PHAE2.180e-3376.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBI8_ECTSI5.130e-1082.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12679contigEcto-sp13_S_contig12679:1113..1972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12679.2215.1mRNA_Ecto-sp13_S_contig12679.2215.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12679 924..2027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12679.2215.1 ID=prot_Ecto-sp13_S_contig12679.2215.1|Name=mRNA_Ecto-sp13_S_contig12679.2215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MARGGGGAPRAVPATLGAMMDLASKDPAEFTRIIEENPRLLEQLERKAAS
TTTSGSSGVRLPPSSRQGGAAGAAEDPRRALDPRRADPRRDPRRQRK*
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