prot_Ecto-sp13_S_contig1266.2201.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1266.2201.1
Unique Nameprot_Ecto-sp13_S_contig1266.2201.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length456
Homology
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 517 bits (1331), Expect = 1.040e-181
Identity = 264/287 (91.99%), Postives = 271/287 (94.43%), Query Frame = 0
Query:  121 IADPPPLTHDQLPEESLYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPLDG 407
            +ADPPPLTHDQLPEES+YLLDGTSMLFRAFYGRGAGGY+ASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTF+MEGYEADDVMATLAR           WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGS+EVLAKFGV+PSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSM IRGSK LQTLLSQPGIQEEAMLYREIATLDDE  + G
Sbjct:    1 MADPPPLTHDQLPEESIYLLDGTSMLFRAFYGRGAGGYLASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFEMEGYEADDVMATLAR-----------WGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSDEVLAKFGVQPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMGIRGSKGLQTLLSQPGIQEEAMLYREIATLDDEGSVSG 276          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A835ZC56_9STRA (5'-3' exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC56_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.220e-62
Identity = 111/185 (60.00%), Postives = 133/185 (71.89%), Query Frame = 0
Query:  115 VEARPAIADPPPLTHDQLPEESLYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRR 299
            V A PA        H  +P+E+L++LDGTSMLFRA +G+G+  Y+A++GATEV AVLAMGIE AQFI EV+PRY+A+AFDV R +TFRR+L P YKA R P P DL LQ+PLA AL++ LGC      GYEADDVMATLA            WGRS+GL VV+ S DKDM QLVR+RVHVM PRR
Sbjct:   43 VAAAPAAGGITEFKHTDVPDETLWVLDGTSMLFRAHFGKGSQSYLAADGATEVAAVLAMGIELAQFIEEVQPRYLAVAFDVDRNSTFRRQLMPTYKAHRPPHPRDLLLQLPLATALTKCLGCTCLSQRGYEADDVMATLAT-----------WGRSIGLSVVLVSEDKDMLQLVRERVHVMAPRR 216          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A2E9QWV8_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9QWV8_9DELT)

HSP 1 Score: 179 bits (453), Expect = 5.370e-49
Identity = 112/309 (36.25%), Postives = 163/309 (52.75%), Query Frame = 0
Query:  139 LLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDR----VHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPLDGIDAITSSTFLYRGASPEAEGVMSALGFQAPLRMIQE 443
            L DGTSMLFR++YG  +  +++ +G  EVG V  +G      +   +P   A+ FD G+ T FR ++Y  YKA R   P DL  Q  L + +  +LG R + + GYEADD++ATL               R  G G  + S DKD+CQLV D+    V     +R  Y   G   V  + GVKPS   D   L+GD  DNIPG+KG+GPK    LL+ FE ++ ++A +D V ++  RG+K+L   L     +E+  + R++ TL  +VP+D   A  +    + G    A+G    LGF  PL  ++E
Sbjct:   12 LYDGTSMLFRSYYGMRS--FLSPDGV-EVGGVFGVGQTLVSMMRRQRPHNCAVVFDAGQRT-FRNEIYELYKANRGEPPEDLIPQFDLVQEMIRSLGFRCYCVPGYEADDLIATLTSL-----------ARKSGFGTRIVSVDKDICQLVTDQQPPVVIYHAKKRLFYNEAG---VFERMGVKPSQAIDYQALVGDSTDNIPGIKGVGPKAAQALLDSFENIDAIYADIDRVQTLSFRGAKSLAKKLEAG--REQVAIARQLVTLKHDVPIDTTIASFADETRWEGPMLNADGFFDQLGFHRPLYQLRE 300          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A2D5BSF5_9BACT (Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5BSF5_9BACT)

HSP 1 Score: 177 bits (450), Expect = 9.250e-49
Identity = 115/302 (38.08%), Postives = 165/302 (54.64%), Query Frame = 0
Query:  137 LYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPLDGIDAITSSTFLYRGASPEAEGVMSALGFQAPL 438
            L++LDGT+ LFRA++        A +G  EVGAV   G    + +   +P ++A+ FD G   TFR +++P YKA R   P DL  Q  LA  L  ALG  +F  +GYEADD+MATLAR+   A           GL   + + DKD+ QLV D V V+ P+      +    V  +FGV+ S L D   L GD  DN+PGVKG+GPK    L+  F +++G++  LD V ++++RG+K L   L +   +EEA L R +  LD+E P++  +  T      RG    A+   S +GF +PL
Sbjct:    6 LHVLDGTAALFRAWFS--VNERPAPDGV-EVGAVWGFGQWLGKVVRRTRPTHLAVVFDAGM-WTFRNEIWPDYKANRGEPPDDLVPQFDLAYDLCVALGFPSFRTDGYEADDLMATLARRAVGA-----------GLEAALVTPDKDVLQLVSDAVCVLDPKE--LDAIDGPMVKERFGVEASQLVDYLALAGDPTDNVPGVKGVGPKTAQALIAAFGSVDGLYEDLDRVATLDVRGAKGLGDKLREH--EEEARLSRRLVVLDEEAPMEP-EIRTLGDLRLRGTPDGADRFFSRVGFPSPL 287          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A1F9K7W9_9DELT (53EXOc domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 TaxID=1797892 RepID=A0A1F9K7W9_9DELT)

HSP 1 Score: 174 bits (441), Expect = 2.470e-47
Identity = 100/273 (36.63%), Postives = 161/273 (58.97%), Query Frame = 0
Query:  133 PEESLYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPL 405
            P   +YL+DG+S +FRAF+       + ++      A+L       +F+   KP Y+A+A D G+ET FR ++Y  YK  R   P  L  Q P  + + +A+     ++EG+EADD++ATLA+ D  A           GL VV+ S DKD+ QLV ++V ++   ++ +  + +  V  KFGV P  + ++ GL+GD  DNIPGVKGIG K  S L++++E+LE +FA LD V   +++G++ ++  L+    +EEA+L RE+AT+  +VP+
Sbjct:    4 PPPCVYLVDGSSYIFRAFFALPP---LTNSAGLPTQAILGFTTMTLKFLKTYKPEYLAVALDAGKET-FRNQIYQAYKGNRPEAPPQLIPQFPYIRKVLKAMSVVVLELEGFEADDIIATLAK-DFSAR----------GLSVVIVSGDKDLMQLVGEKVKLLDTAKEKW--IDAAAVKEKFGVAPEKVTEVMGLMGDAIDNIPGVKGIGEKTASALIQRYESLENLFAHLDDVEKSDLKGARRIRNALADR--KEEALLSRELATVRTDVPI 257          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A3N9VXZ7_9DELT (Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A3N9VXZ7_9DELT)

HSP 1 Score: 177 bits (450), Expect = 8.460e-47
Identity = 107/269 (39.78%), Postives = 159/269 (59.11%), Query Frame = 0
Query:  137 LYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPL 405
            L+LLDG+S ++RA+YG      +A++G     AV          + E  P Y+A+ FD  RE TFRR+LYP+YKA R  +P DL LQ+P  + + +AL     +  G+EADDV+A+LAR+ A           + GL V V + DKD+ Q+V +R+ ++   +D  +  G  EVL +FGV P  +PD+ GL GD ADNIPGV GIG K  ++L+++F +LEGVF   D      + G K  ++L S    Q++A+L + +AT+  +V L
Sbjct:    7 LFLLDGSSYIYRAYYGVRD---LATSGGMPTNAVFGFTRMLLCLLQEHSPEYLAVVFDRPREETFRRELYPEYKANRDAMPEDLVLQVPYIRKVLQALNIPALEAPGFEADDVIASLARRSA-----------AEGLRVTVVTGDKDLMQIVGERICLLDTMKDCCS--GPLEVLERFGVPPELVPDVLGLAGDTADNIPGVPGIGEKTAAKLVKQFGSLEGVFRWKD-----LVNGKKRRESLQSY---QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A353MEJ4_9DELT (Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422 RepID=A0A353MEJ4_9DELT)

HSP 1 Score: 177 bits (448), Expect = 1.800e-46
Identity = 107/270 (39.63%), Postives = 153/270 (56.67%), Query Frame = 0
Query:  137 LYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPLD 406
            LYLLDG+S ++RA+YG       A++G     AVL       + + E +P Y A+ FD  RE TFRR +YP YKA R+ VP DL LQ+P  + + +AL     +  G+EADDV+ATLAR+ A A           G+ V V + DKD+ Q+V DR+ ++   +   +  G +EVL +FGV P  + D+ GL GD ADNIPGV GIG K  + L+++F +LEGV   +  V     R S  L          ++A L + +AT+  +VPL+
Sbjct:    7 LYLLDGSSYIYRAYYGFRES---ATSGGMPTNAVLGFTRMLLELVQEHRPEYFAVVFDPPREETFRRDIYPAYKAHREAVPEDLLLQLPYIRRILQALNVPALEAPGFEADDVIATLAREYAAA-----------GIEVTVVTGDKDLLQIVSDRIALLDTMKGKRS--GPQEVLDRFGVAPELVADVLGLAGDSADNIPGVPGIGEKTAAMLVQRFGSLEGVLQWITLVNGKSRRESLHLHA--------DQARLSKRLATVRYDVPLE 252          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A533SDF6_9BACT (Ribonuclease H n=1 Tax=bacterium TaxID=1869227 RepID=A0A533SDF6_9BACT)

HSP 1 Score: 176 bits (447), Expect = 2.280e-46
Identity = 105/269 (39.03%), Postives = 156/269 (57.99%), Query Frame = 0
Query:  137 LYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPL 405
            LYLLDG+S ++RAFYG      +A++G     AV          + E  P Y+A+ FD  R+ TFRR++YP+YKA R  +P DL  QIP  + + EAL   T +  G+EADDV+ATLAR+ A             G+ V V + DKD+ Q+V D++ ++   +D  +  G +EVL +FGV P  +PD+ GL GD +DNIPGV GIG K  ++L+++F +LEGV           + G K  + L +    Q++A+L + +AT+  +V L
Sbjct:    7 LYLLDGSSYIYRAFYGVRD---LATSGGMPTNAVFGFTRMLLGLLQEHTPEYLAVVFDRPRDETFRREIYPEYKANRDAMPEDLVPQIPYIRKVLEALNIPTLEAPGFEADDVIATLARRTAEE-----------GIRVTVVTGDKDLMQIVNDKICLLDTMKDSCS--GPQEVLERFGVPPERVPDVLGLSGDTSDNIPGVPGIGEKTAAKLVKQFGSLEGVLR-----WRSLVNGKKCRENLHAY---QDQALLSKTLATVRYDVDL 251          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: A0A1G2W2X7_9DELT (Ribonuclease H n=1 Tax=Desulfuromonadaceae bacterium GWC2_58_13 TaxID=1801896 RepID=A0A1G2W2X7_9DELT)

HSP 1 Score: 176 bits (445), Expect = 4.670e-46
Identity = 119/321 (37.07%), Postives = 169/321 (52.65%), Query Frame = 0
Query:  137 LYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATL----DDEVPLDGIDAITSSTFLYRGASPEAEGVMSALGFQAPLRMIQEGSKRPSARAS 453
            LYLLDG+S ++RA+YG      +A+ G   V AV          + E +P Y+A+ FD  RE TFRRK+YP YKA R  +P DL  QIP  K + +AL     +  G+EADDV+ATLAR+ A           + G+ V V + DKD+ Q+V DR+ ++   +D  +  G  EV  +FGV P  +PD+ GL GD +DNIPGV G+G K  S L+++F +LEGVF          + G K  + LL+    +++A L + +AT+    D  VPL  ++  T +         E E    A  F  P   + E     S  AS
Sbjct:    7 LYLLDGSSYIYRAYYGFRD---LATAGGMPVNAVFGFTRMLLGLLQETRPDYLAVVFDRPREETFRRKIYPGYKAHRDAMPEDLVPQIPYIKRIVQALNIPALEAPGFEADDVIATLARRYA-----------ADGIEVTVVTGDKDLMQIVGDRIGLLDTMKDKRS--GPREVCDRFGVPPELVPDVLGLAGDASDNIPGVPGLGEKTASELVQRFGSLEGVFE-----WKSLVSGKKRRENLLAH---EDQARLSKILATVRYDVDLPVPLAELERQTPNLAELIPLLRELEFETLATAFTPPAPGVVELHSDGSGTAS 303          
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Match: UPI001CC9B019 (hypothetical protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CC9B019)

HSP 1 Score: 170 bits (431), Expect = 8.170e-46
Identity = 116/312 (37.18%), Postives = 162/312 (51.92%), Query Frame = 0
Query:  133 PEESLYLLDGTSMLFRAFYGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVMATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVH--VMQPRRDGYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLLEKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLDDEVPLDGIDAITSSTFLYRGASPEAEGVMSALGFQAPLRMIQ 442
            P   L+++D T++LFRA+YG        S     VGAVL +G      +    P  V + +D GR TTFR ++ P+YKA R   P DL  Q   A+    A G  T  +  +EADD+MATLAR  A           S GL   + S DKD+CQLVRD     V++  R G T  G+  V+ + GV+PS + D   L+GD +DN+PGV G+GPK    LL  F  L+ ++A L  V  + +RG+K L   L     +E A L R +  L D VPL G+D    +   + G   +A+   +ALG    LR ++
Sbjct:    5 PAPELWVIDATALLFRAYYGMPP---KLSPAGEPVGAVLGLGHLLRGLLRRA-PERVVLVYDAGR-TTFRNRIDPRYKANRGEPPPDLAPQFERARQFGAAAGFVTLSVPDFEADDLMATLARGAA-----------SAGLRTRLLSVDKDLCQLVRDEAPAVVLEDPRTGDTWDGAG-VVRRMGVRPSQVVDYLALVGDTSDNVPGVPGVGPKAAQALLAAFGDLDALYASLGEVAGLPLRGAKGLAARLEAG--REAAFLARSLVRLHDAVPLGGLDLHAHTR--WTGPRDDADEFFTALGSVGALRGLR 295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1266.2201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE1.040e-18191.9953EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835ZC56_9STRA1.220e-6260.005'-3' exonuclease n=1 Tax=Tribonema minus TaxID=30... [more]
A0A2E9QWV8_9DELT5.370e-4936.2553EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A2D5BSF5_9BACT9.250e-4938.08Exodeoxyribonuclease IX n=1 Tax=Planctomycetes bac... [more]
A0A1F9K7W9_9DELT2.470e-4736.6353EXOc domain-containing protein n=1 Tax=Deltaprot... [more]
A0A3N9VXZ7_9DELT8.460e-4739.78Ribonuclease H n=1 Tax=Geobacter sp. TaxID=46610 R... [more]
A0A353MEJ4_9DELT1.800e-4639.63Ribonuclease H n=2 Tax=Geobacteraceae TaxID=213422... [more]
A0A533SDF6_9BACT2.280e-4639.03Ribonuclease H n=1 Tax=bacterium TaxID=1869227 Rep... [more]
A0A1G2W2X7_9DELT4.670e-4637.07Ribonuclease H n=1 Tax=Desulfuromonadaceae bacteri... [more]
UPI001CC9B0198.170e-4637.18hypothetical protein n=1 Tax=Nannocystis pusilla T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0024215'-3' exonuclease, N-terminalSMARTSM0047553exo3coord: 132..414
e-value: 1.8E-73
score: 260.0
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 318..353
e-value: 6.2E-10
score: 49.0
NoneNo IPR availableGENE3D3.40.50.1010coord: 137..406
e-value: 6.4E-65
score: 220.9
NoneNo IPR availableGENE3D1.10.150.20coord: 319..400
e-value: 6.4E-65
score: 220.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..455
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.648
IPR0200465'-3' exonuclease, alpha-helical arch, N-terminalPFAMPF027395_3_exonuc_Ncoord: 137..315
e-value: 1.3E-40
score: 138.9
IPR020045DNA polymerase I-like, H3TH domainPFAMPF013675_3_exonuccoord: 316..406
e-value: 5.1E-18
score: 65.5
IPR038969Flap endonucleasePANTHERPTHR42646FAMILY NOT NAMEDcoord: 135..439
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 316..409
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 136..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1266contigEcto-sp13_S_contig1266:86..6030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1266.2201.1mRNA_Ecto-sp13_S_contig1266.2201.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1266 86..6030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1266.2201.1 ID=prot_Ecto-sp13_S_contig1266.2201.1|Name=mRNA_Ecto-sp13_S_contig1266.2201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=456bp
MRRGNRGAVRAPLFALSLALHANLTSSLLHNLGDAISRNHATTTAAAAGT
AAGRRRRARPRPVWHFHGNISSPGRGQSSRSPRCSVRSGPEVAAAAAADV
ENGGPDVAGAEGHSVEARPAIADPPPLTHDQLPEESLYLLDGTSMLFRAF
YGRGAGGYMASNGATEVGAVLAMGIEFAQFINEVKPRYVAMAFDVGRETT
FRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEALGCRTFDMEGYEADDVM
ATLARQDARAEAWLGWWGRSVGLGVVVCSSDKDMCQLVRDRVHVMQPRRD
GYTILGSEEVLAKFGVKPSALPDLFGLIGDVADNIPGVKGIGPKGGSRLL
EKFETLEGVFAGLDGVGSMEIRGSKALQTLLSQPGIQEEAMLYREIATLD
DEVPLDGIDAITSSTFLYRGASPEAEGVMSALGFQAPLRMIQEGSKRPSA
RASTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0024215-3_exonuclease_N
IPR008918HhH2
IPR0200465-3_exonucl_a-hlix_arch_N
IPR020045DNA_polI_H3TH
IPR038969FEN_bact-like
IPR0362795-3_exonuclease_C_sf
IPR029060PIN-like_dom_sf