prot_Ecto-sp13_S_contig12597.2144.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12597.2144.1
Unique Nameprot_Ecto-sp13_S_contig12597.2144.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length267
Homology
BLAST of mRNA_Ecto-sp13_S_contig12597.2144.1 vs. uniprot
Match: A0A6H5KUF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF6_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 4.300e-122
Identity = 211/258 (81.78%), Postives = 223/258 (86.43%), Query Frame = 0
Query:    1 MESKGEGNLLARPSQAKLPLYGVTAILLLLLLLASAGVSSFADPSAEGAEVVTLSLSTSPQESESLSSGXXXXXXXXXXXXXXXXXXDS-RACTVDDLVPTHGHYEDGGGSDGGDDLSGMWDTSSMVAPPFDCTCGTLKASYFCPNLGTGGYPKWNTSGGCERRQRSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRMVVDRESLAQEDTLVDEGLQCRSCVNSHKLRRTLLEHKCISDESKKEAC 257
            M+S+ EG LLARPS+AKLPLYGV A LLLLLLLASAGVS FADPSAEGA+VVTLS+ST  Q        XXXXXXXXXXXXXXXXXX   RACTVDDLVP HG+YEDGGG DGG DLSGMWD SSMVAPPFDCTC TLKASYFCPNLGTGGYPKWNTSG CERR+RSALQNEPLPP FRVLFYGNSHLRQVVEGIVCAYS+SIRSRCLR+VV   SLA ED LVDE LQCR CVNSHK R  LLEH+CIS+E+KKEAC
Sbjct:    1 MKSQEEGKLLARPSKAKLPLYGVMAALLLLLLLASAGVSGFADPSAEGAKVVTLSVSTPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACTVDDLVPPHGNYEDGGG-DGGYDLSGMWDKSSMVAPPFDCTCRTLKASYFCPNLGTGGYPKWNTSGACERRERSALQNEPLPPAFRVLFYGNSHLRQVVEGIVCAYSTSIRSRCLRVVVGGGSLAPEDALVDEDLQCRGCVNSHKQRNMLLEHECISEEAKKEAC 257          
BLAST of mRNA_Ecto-sp13_S_contig12597.2144.1 vs. uniprot
Match: D7G2P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P7_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 4.350e-113
Identity = 204/265 (76.98%), Postives = 216/265 (81.51%), Query Frame = 0
Query:    1 MESKGEGNLLARPSQAKLPLYGVTAILLLLLLLASAGVSSFADPSAEGAEVVTLSLSTSPQESESLSSGXXXXXXXXXXXXXXXXXXDSRACTVDDLVPTHGHYEDGGGSDGGDDLSGMWDTSSMVAPPFDCTCG-------TLKASYFCPNLGTGGYPKWNTSGGCERRQRSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRMVVDRESLAQEDTLVDEGLQCRSCVNSHKLRRTLLEHKCISDESKKEACR 258
            MES+GEG LLARPSQAKLPLYGV A+ L++LLLASA VSSFADPSAEGAEVVTLSLST PQESESL   XXXXXXXXXXXXXXXXXX                       D   DLSGMWD SSMVAPPFDCTC         L ASYFCPNLGTGGYPKW+TSGGCERR+RSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLR+VVD ESLAQEDTLVDE LQCRSCV S KLRRTLLEH+CIS+++K+EACR
Sbjct:    1 MESQGEGKLLARPSQAKLPLYGVMAVSLVVLLLASAVVSSFADPSAEGAEVVTLSLSTPPQESESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---DLSGMWDKSSMVAPPFDCTCSGSGRAGRALNASYFCPNLGTGGYPKWSTSGGCERRERSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRVVVDGESLAQEDTLVDEDLQCRSCVYSRKLRRTLLEHECISEDAKEEACR 262          
BLAST of mRNA_Ecto-sp13_S_contig12597.2144.1 vs. uniprot
Match: A0A6H5KAG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 4.620e-22
Identity = 60/165 (36.36%), Postives = 79/165 (47.88%), Query Frame = 0
Query:   90 RACTVDDLVPTHGHYEDGGGSDGGDDLSGMWDTSSMVAPPFDCTCGTLKASYFCPNLGTGGYPKWN----TSGGCERRQRSALQNE--PLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSRCLRMVVDRESLAQEDTLVDEGLQCRSCVNSHKLRRTLLEHKCI 248
            R CTVD+L+P          S+      G+W       PP+ C C   KA YFCPNLG+G YP+W     T G C    R  + +   P PP  +VLFYGNSH+RQ +E I+C +   + S+ LR V    +       V     CR+C      + TLL   CI
Sbjct:  120 RYCTVDELLPLKKSPHSALSSEWSQGQGGVW------KPPYGCDCAFSKARYFCPNLGSGVYPRWVPRAVTRGDCRSATREEMSSRGAPFPPDSKVLFYGNSHMRQTLEAILCLFQKDVVSKRLRFVSATNANETAYLEVPGDTPCRACSVWTFFKDTLLNSGCI 278          
BLAST of mRNA_Ecto-sp13_S_contig12597.2144.1 vs. uniprot
Match: A0A835Z986_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z986_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.230e-7
Identity = 32/89 (35.96%), Postives = 44/89 (49.44%), Query Frame = 0
Query:  118 GMWDTSSMVAPP-FDCTCGTLKASYFCPNLGTGGYPKWNTSGGCERRQRSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSSSIRSR 205
            G W+  +    P +DC+C   KA Y C        P W      +   R+   N  +PPG RVLF GNSH+RQ+VE  +CA+   +  R
Sbjct:   57 GSWEQRTAHQEPLYDCSCPLAKARYHCHEFNAVDGPVWVPRALVKGECRALPHNPLVPPGARVLFAGNSHMRQLVESGLCAHRHEVARR 145          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12597.2144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KUF6_9PHAE4.300e-12281.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2P7_ECTSI4.350e-11376.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAG2_9PHAE4.620e-2236.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z986_9STRA1.230e-735.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12597contigEcto-sp13_S_contig12597:58..4337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12597.2144.1mRNA_Ecto-sp13_S_contig12597.2144.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12597 58..4337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12597.2144.1 ID=prot_Ecto-sp13_S_contig12597.2144.1|Name=mRNA_Ecto-sp13_S_contig12597.2144.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp
MESKGEGNLLARPSQAKLPLYGVTAILLLLLLLASAGVSSFADPSAEGAE
VVTLSLSTSPQESESLSSGGAGEEGGGIAGNGGGGGGDSRACTVDDLVPT
HGHYEDGGGSDGGDDLSGMWDTSSMVAPPFDCTCGTLKASYFCPNLGTGG
YPKWNTSGGCERRQRSALQNEPLPPGFRVLFYGNSHLRQVVEGIVCAYSS
SIRSRCLRMVVDRESLAQEDTLVDEGLQCRSCVNSHKLRRTLLEHKCISD
ESKKEACRWVCCCCCW*
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