prot_Ecto-sp13_S_contig12568.2126.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12568.2126.1
Unique Nameprot_Ecto-sp13_S_contig12568.2126.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 5.470e-93
Identity = 176/206 (85.44%), Postives = 187/206 (90.78%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDSDGL 206
            YSYGHQDGLWEYNTM N G YGFDPHDDSDNLRIHNNIVYENGNHGIIASKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++GSGSACIAIFESFGIEISDN+CTDNEEGIRLSMGSSYNKIFDNQVIDTAGR++W+YLGSDE+ ASAATDGMCTGNLFQNNYL+ A  GV  +ETRD MLIGNT +  E +   DSDGL
Sbjct:  257 YSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGL 462          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 4.730e-92
Identity = 170/187 (90.91%), Postives = 176/187 (94.12%), Query Frame = 0
Query:   20 QYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDSDGL 206
            QYGFDPHDDSDNLRIHNNIVYENGNHGIIASKR     XXXXXXXXXXXXXXXXXXXXXXXXXXXX  SGSGSACIAIFESF IEISDNLCT NEEGIRLSMGSSYNKIFDNQVIDTAGR+IWMYLGSDEVEASAATDGMCTGNLFQNNYLE ++TGVA+ ETRDTMLIGNTFIDT+NNEW+DSDGL
Sbjct:  137 QYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGL 323          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: A0A6H5LHR7_9PHAE (MEP7d protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHR7_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 6.400e-70
Identity = 136/178 (76.40%), Postives = 140/178 (78.65%), Query Frame = 0
Query:   43 GNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGR------------------AIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRD 202
            GNHGIIASKR                XXXXXXXXXXXXXXXXX  SGSGSACIAIFESF IEISDNLCT+NEEGIRLSMGSSYNKIFDNQVIDTAGR                  AIWMYLGSDEVEASAATDGMCTGNLFQNNYLER+DTGV+L ETRDTMLIGNTFIDT+NNEWRD
Sbjct:   21 GNHGIIASKRCNDVSIQNNVVYDNALXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTNNEEGIRLSMGSSYNKIFDNQVIDTAGREFCYHIMPQCGWLTYPRGAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERSDTGVSLTETRDTMLIGNTFIDTDNNEWRD 198          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: A0A6H5L0I1_9PHAE (MEP7a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I1_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.160e-54
Identity = 99/164 (60.37%), Postives = 107/164 (65.24%), Query Frame = 0
Query:   43 GNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDSDGL 206
            GNHGIIASKR                                 T+SGSGSACIAIFESFGIEISDN+CTDNEEGIRLS+GSSYNKIFDNQVIDTAG          E+ ASAATDGMCTGNLFQNNYL+ A  GV  AETRDTM+IGNT +    +   DSDGL
Sbjct:   10 GNHGIIASKRCNDVSIQNNVVYDNALHGIMLHRSSDDGIIRNNTVSGSGSACIAIFESFGIEISDNVCTDNEEGIRLSLGSSYNKIFDNQVIDTAGH---------EIIASAATDGMCTGNLFQNNYLDGASIGVRFAETRDTMVIGNTMVALGGSLIDDSDGL 164          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.000e-32
Identity = 109/203 (53.69%), Postives = 134/203 (66.01%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDS 203
            Y+YGHQDGLWEYN MH   +YGFDPHDDSDNLRIHNNIV+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          AIFES   + S+N CTDN+ G R S+G+S+NKI+DN+V D+    I+MY GSD    S   DG+ + N+  NN ++ A  G+ + +T      GN   +T +  +R+S
Sbjct:  261 YTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNS 460          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.920e-29
Identity = 78/205 (38.05%), Postives = 102/205 (49.76%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDS 203
            YSYGHQ G+W  N MH+  QYGFDPHDDSD L I  N VY N NHGIIASKR                                   TI+    A IA+ ESF  +I  N+    + GIR+S+GS  N+++ N   D +   ++ Y GSDE + S   DG  +GN+   N +E    GV + E  D     NTFI+ +  E+ +S
Sbjct:  651 YSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPES 852          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 5.290e-28
Identity = 76/205 (37.07%), Postives = 100/205 (48.78%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDS 203
            YS+GHQ G+W  N MH+  QYGFDPHDDSD L I  N VY N NHGIIASKR                                   TI+  G A IA+ E+ G +I DN     E GIR+ +GSS NK+ DN   +     ++ Y+GSDE        G    N F NN ++  +TGV + E+ +  +  N F  T   E+ ++
Sbjct:  211 YSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNA 412          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.770e-27
Identity = 79/205 (38.54%), Postives = 108/205 (52.68%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--ISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEWRDS 203
            Y+YGH+ G W  N MH+  +YGFDPHDDSD L IH+N VY NGNHGIIASKR   XXXXXXXXXX                          +G A +A+ ESF  ++S+N   DN+ G+R+S+G + N    N + D++   ++ Y GSD+        G    N+F +N +   D  + L     T  I NTF   +   + D+
Sbjct:   87 YTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDD--PWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDA 289          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.710e-27
Identity = 68/196 (34.69%), Postives = 96/196 (48.98%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--ISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFID 194
            Y+YGHQ G W  N +H+   YG+DPHDDSD L IH+N+VY+N  HGIIASKR                                      G+G A +A+ ES   EIS N+   N+ GIR+S+G   N +++N + +T+  AI+ Y GSD  E      G    N+F +N +      + L E+  T +  N F +
Sbjct:   53 YTYGHQQGDWRRNVVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPT--GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYE 246          
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 4.010e-27
Identity = 75/201 (37.31%), Postives = 97/201 (48.26%), Query Frame = 0
Query:    1 YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TISGSGSACIAIFESFGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEVEASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNE 199
            YS+GH  G+W  N MH+  QYGFDPHDDSDNL I  N V+ NGNHGIIASKR                                   T+     A +AI ES G  I DN  T+ + GIRLS+G+S N + +N+  +     I+ Y G+DE EAS   DG+   N F  N +E    GV + +        N F +  + E
Sbjct:  667 YSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGE 864          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12568.2126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G1_ECTSI5.470e-9385.44Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G2_ECTSI4.730e-9290.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5LHR7_9PHAE6.400e-7076.40MEP7d protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5L0I1_9PHAE2.160e-5460.37MEP7a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5K9I9_9PHAE1.000e-3253.69MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LC73_ECTSI3.920e-2938.05Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI5.290e-2837.07Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ9_9PHAE1.770e-2738.54Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5K1D5_9PHAE3.710e-2734.69MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI4.010e-2737.31Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 77..99
e-value: 1.3
score: 18.0
coord: 53..75
e-value: 1.4
score: 17.9
coord: 160..181
e-value: 1400.0
score: 6.2
coord: 5..27
e-value: 9200.0
score: 0.3
coord: 100..121
e-value: 1200.0
score: 6.7
coord: 123..145
e-value: 1700.0
score: 5.6
coord: 29..51
e-value: 13.0
score: 14.7
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 52..91
e-value: 6.3E-8
score: 30.2
coord: 95..135
e-value: 1.4E-5
score: 22.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..158
e-value: 2.0E-46
score: 160.6
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 10..134
e-value: 2.0E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 29..192
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 29..192
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 6..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12568contigEcto-sp13_S_contig12568:337..4791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12568.2126.1mRNA_Ecto-sp13_S_contig12568.2126.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12568 337..4791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12568.2126.1 ID=prot_Ecto-sp13_S_contig12568.2126.1|Name=mRNA_Ecto-sp13_S_contig12568.2126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
YSYGHQDGLWEYNTMHNCGQYGFDPHDDSDNLRIHNNIVYENGNHGIIAS
KRCNDVSIQNNVVYDNALHGIMLHRSSDRGIIRNNTISGSGSACIAIFES
FGIEISDNLCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRAIWMYLGSDEV
EASAATDGMCTGNLFQNNYLERADTGVALAETRDTMLIGNTFIDTENNEW
RDSDGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR022441Para_beta_helix_rpt-2
IPR012334Pectin_lyas_fold
IPR007742NosD_dom
IPR011050Pectin_lyase_fold/virulence